Pseudohalocynthiibacter aestuariivivens: G5B38_03705
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Entry
G5B38_03705 CDS
T06463
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Pathway
paed03420
Nucleotide excision repair
paed03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G5B38_03705
03430 Mismatch repair
G5B38_03705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paed03400
]
G5B38_03705
Enzymes [BR:
paed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5B38_03705
DNA repair and recombination proteins [BR:
paed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G5B38_03705
MMR (mismatch excision repair)
Other MMR factors
G5B38_03705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DapB_N
Motif
Other DBs
NCBI-ProteinID:
QIE44701
LinkDB
All DBs
Position
complement(769205..771556)
Genome browser
AA seq
783 aa
AA seq
DB search
MSSYDESDAFEGASLAARAMAARGAPYLDELNPAQRSAVEALDGPVLMLAGAGTGKTKAL
TARIVHLLNTGRARPNEILSVTFTNKAAREMKDRVGRLLGQSIEGMPWLGTFHSICVKLL
RRHAELAGLKSNFTILDTDDQVRLMKQLIQAAGIDDKRWPARMLAGIIDNWKNRAWTPAN
LPASEAGAYDGKGPQLYALYQARLKELNAVDFGDLLLHVVTIFQTHDDVLQQYQRWFRYI
LVDEYQDTNVAQYLWLRLLAGAHKNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAHVV
RLEQNYRSTPHILAAASGVIAGNKGRLGKELWTEAEEGEKVRLIGHWDGEEEARWIGEEI
EAMQGGTRGMRPIRRDEVAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERMEIRDAM
AYFRVVTSPSDDLAFERIVNTPKRGLGDMRQQTIQRIARANGVPLMQGAALAVEQGEIKG
KGGTELARLLDGLTRWGRLIGDASVSHVELAEMILDESGYTGMWQNDKTPEAPGRLENLK
ELVKALEQFENLQGFLEHVSLIMDNESDDTEEKVSIMTLHAAKGLEFPAVFLPGWEDGLF
PSQRSMDESGQVGVEEERRLAYVGITRAEEVCTISFAGNRRVFGQWQSALPSRFIDELPE
AHVEVLTPPGLYGGGYGAAGMGGVQSSIDARVAEANVYNSPGWKRLQARAGQRPVAQPGE
ARNTVIDMKAVSSHSVGERVFHQKFGYGAIIGIEGDKLEIDFEKAGTKKVVARFISAADD
IPF
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttatgacgaatccgacgcctttgaaggcgcatcgctggccgcgcgggcaatg
gctgcccgtggcgcgccatatttggacgagctgaacccggcgcagcggtccgcggtcgag
gcgctggatggtccggtcctgatgctggcgggggccggcaccggcaagaccaaggcgttg
accgcacggatcgtgcatctgctgaacaccgggcgggcgcgcccgaacgagatcctgtcg
gtcacgttcaccaacaaggccgcgcgcgagatgaaagatcgcgttggccgcctgttgggg
cagagcatcgaggggatgccgtggctgggcacctttcattcgatttgtgtcaagctgctg
cgccgccacgccgaactggccgggctgaagtcgaattttaccattctggacaccgacgat
caggttcggctgatgaagcagttgattcaggctgcgggtattgatgacaagcggtggccc
gcacggatgctggcgggcattatcgacaattggaagaaccgggcatggacgcccgcgaac
ctgcccgcgtccgaggccggggcctatgacggcaaggggccgcagttgtacgcgctctat
caggcgcggttgaaggaactgaacgcagtggatttcggtgatctgctgctgcatgtggtc
acgatttttcagacacatgatgacgtcttgcagcagtatcagcggtggttccgctatatt
ctggtggacgagtatcaggataccaacgtggcgcagtacctgtggctgcggctattggcc
ggggcgcacaagaatatctgctgtgtcggagatgacgatcagtcgatctatggctggcgt
ggtgcagaagtaggcaatatcctgcggtttgaaaaggattttcccggcgcacatgtggtc
aggctggagcagaattaccgctcgaccccgcatattctggccgctgcctctggcgtgatc
gcgggcaacaaggggcgattgggcaaggagttgtggaccgaggccgaggagggcgagaag
gtgcgcctgatcggccattgggacggcgaggaagaggcccgctggatcggcgaagaaatc
gaggcgatgcagggcggcacgcgtgggatgcgtcccatccgccgggatgaggtggcgatc
ttggtgcgcgcgtcccaccagatgcgcgcgttcgaggatcggtttctgaccatcggatta
ccttatcgggtgattggcggaccgcgcttttatgagcggatggagattcgcgacgcgatg
gcctatttccgcgtcgtgaccagcccgagcgatgatctggcattcgagcggatcgtgaac
acgcccaaacgcgggctgggcgacatgaggcaacaaaccatccagcggatcgcccgcgcc
aatggtgtgccgctgatgcaaggcgcggcactggcggtcgagcagggcgagatcaagggt
aagggtggcaccgagttggcgcgtctgctggacggtctgacgcgctggggccggttgatc
ggggatgctagtgtcagccatgtcgagttggccgagatgatcctagatgagagcggctat
accggcatgtggcaaaacgacaagacgcccgaggcgcccggtcggctggagaacctcaag
gaattggtcaaggcgctggagcagttcgagaacctgcaagggtttctggagcatgtcagt
ctgatcatggacaacgaaagcgatgatactgaggaaaaagtcagcatcatgacgctgcac
gcggccaaggggctggaatttcccgccgtgtttctgccgggctgggaggatgggctgttt
ccgtcgcagcggtctatggacgagagcggccaagtgggcgtcgaggaagaacggcggctg
gcctatgtcggtatcacgcgggccgaagaagtctgtaccatctcatttgcgggcaaccgg
cgggtgttcggccaatggcagtccgcgttgccgtcgcgtttcatcgatgagttgcctgag
gcacatgtggaggtgctgacgcctccgggcctctatggtggtggctatggcgcggcgggg
atggggggcgtgcagagcagcattgatgcgcgggtcgccgaggccaacgtttacaattcc
cccggctggaaacgcctgcaggcgcgcgccgggcagcggcctgtggcgcaacccggcgag
gcgcgcaataccgtgatcgacatgaaggcggtcagttcccacagcgtcggcgagcgcgtg
tttcatcagaaattcggttatggcgcgatcatcgggatcgaaggcgacaagctggaaatc
gactttgaaaaggcgggtaccaagaaagtcgtggcccggtttatttctgcggcggatgat
atcccgttttaa
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integrated database retrieval system
