Pseudohalocynthiibacter aestuariivivens: G5B38_06145
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Entry
G5B38_06145 CDS
T06463
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Pathway
paed00260
Glycine, serine and threonine metabolism
paed00460
Cyanoamino acid metabolism
paed00630
Glyoxylate and dicarboxylate metabolism
paed00670
One carbon pool by folate
paed00680
Methane metabolism
paed01100
Metabolic pathways
paed01110
Biosynthesis of secondary metabolites
paed01120
Microbial metabolism in diverse environments
paed01200
Carbon metabolism
paed01230
Biosynthesis of amino acids
paed01240
Biosynthesis of cofactors
paed04981
Folate transport and metabolism
Module
paed_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
G5B38_06145
09102 Energy metabolism
00680 Methane metabolism
G5B38_06145
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
G5B38_06145
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
G5B38_06145
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
G5B38_06145
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
G5B38_06145
Enzymes [BR:
paed01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
G5B38_06145
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QIE45144
LinkDB
All DBs
Position
1292847..1294130
Genome browser
AA seq
427 aa
AA seq
DB search
MSDSGFFTESLASRDPEIFGAVTDELGRQRDEIELIASENIVSAAVMQAQGTVLTNKYAE
GYPGRRYYGGCQYVDVAENLAIDRAKQLFGCDFANVQPNSGSQANQGVMQALLQPGDTIL
GMSLDAGGHLTHGAAPNQSGKWFNAIQYGVRRQDNLLDYDQVEALAKEHNPKMIIAGGSA
IPRQIDFKRMREIADMVGAWLHVDMAHFAGLVAAGEHPSPFPHAHVATTTTHKTLRGPRG
GMILTNDEALAKKINSAIFPGIQGGPLMHVIAAKAVAFGEALRPEFKTYIQQVRANAVAL
ADQLMKGGLDIVTGGTDTHVLLVDLRPKKVTGNITDAALGRAHITCNKNGVPFDPEKPTV
TSGVRLGTPAGTTRGFKEAEFRQIADWIVEVVDGLAANGPDGNDAVEAKVRGEVAELCAR
FPLYPDL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattccggttttttcaccgaatccctagcctcacgcgatcctgaaattttcggc
gctgtcacagacgagcttggccgtcagcgcgatgaaatcgagctgatcgcctccgagaac
atcgtctctgccgccgtcatgcaggcgcaaggtacagttctgaccaacaaatacgccgaa
ggctatccggggcgccgctattatggcgggtgtcagtatgtcgacgtggcagaaaacctt
gccatcgaccgggccaaacagctctttggttgcgactttgccaacgtgcaacccaattca
ggcagccaagccaaccaaggcgtgatgcaggcgctgctgcaaccgggcgacacgattctg
ggcatgagcctggacgcgggtggacacctgacacacggggccgcgcccaaccaatccggt
aaatggtttaacgcgattcaatacggcgtgcgtcgacaggacaatctgctggattacgat
caggtcgaggcgctggccaaggaacataatcccaagatgatcatcgcgggcggctctgcc
attccgcgtcagatcgacttcaaacgcatgcgcgaaatcgcggacatggtcggcgcttgg
ctgcacgtcgacatggcccactttgccggtctggtggcggcgggtgaacatccctcgccc
ttcccacatgcgcatgtggccaccaccaccacgcacaaaaccctgcgcggcccgcgcggc
ggcatgatcctgaccaatgacgaggcgctggccaagaaaatcaactcggccatctttccc
ggtattcagggcggaccgctgatgcatgtgatcgccgccaaagctgtggcctttggcgag
gcactgcgcccggaattcaagacttacattcagcaggttcgcgccaatgccgtggcgctg
gccgatcagctgatgaaaggcgggcttgatatcgtcaccggcggcaccgacacccatgtt
ctgctggtcgatctgcgccccaagaaagtgaccggcaacatcaccgacgccgcactgggg
cgtgctcatatcacctgcaacaagaatggcgtaccgttcgaccccgaaaagccgaccgtg
accagcggcgtgcgcctaggtacaccggcaggcacaacacgcggcttcaaagaggccgaa
ttccgccagatcgctgattggattgtcgaagtggtcgatggtctggctgccaacggccct
gacgggaacgacgcggtcgaggccaaagtgcgcggtgaagtcgccgagctttgcgcgcgg
ttcccgctctatccagatctctga
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