Pseudohalocynthiibacter aestuariivivens: G5B38_08345
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Entry
G5B38_08345 CDS
T06463
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21826
AraC family transcriptional regulator, glycine betaine-responsive activator
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paed03000
]
G5B38_08345
Transcription factors [BR:
paed03000
]
Prokaryotic type
Helix-turn-helix
AraC family
G5B38_08345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
Motif
Other DBs
NCBI-ProteinID:
QIE45529
LinkDB
All DBs
Position
complement(1740569..1741606)
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AA seq
345 aa
AA seq
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MNMQVRHRPDHGNQIQPSRCETSETAAQTVLIALLPEFHLTELSACLDIFATANECAGRA
IFETHVVSPVGGCMTSSSGLGVSAEDIGMLKARADYIIIPGCVVAGDTMETLRRLLRTYQ
QFSRHIIALSSVVDLLVRLRVLEETDVSAHWNFNHPAQDYAVPANRKLFHRSGRYITSAG
FLGTYDLLLHLIAKQHGWFLAGEVSDRMIKGEIRYEDAPQRRHINQRIRAKHKGLAAAIG
LIEENLESPVPISDLARAAGYSVRQLEREFSKYYGLPPGRYYKNRRLDRAKAQIEQTAMP
VIEIALANGFESTSHFSKSFSQRYGRSPYRLRKTCLGTPVGHDDH
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgcaagtccgacacaggccggatcacggcaaccagatccagccgtcccgatgt
gaaacgtccgagacagccgcgcaaaccgtgctgatcgcgctgttaccggaatttcatctg
accgagctatccgcctgtctggatatttttgccaccgcgaatgaatgcgcgggccgcgcc
atctttgaaacgcatgttgtgtccccggtcggcgggtgcatgacgtcttcgtcgggcctc
ggcgtgagcgccgaagacatcggaatgctaaaggcgcgcgcggattacatcatcatacca
ggctgcgtcgtcgccggggatacgatggaaacgctgcggcgattactgcggacatatcag
cagttttctcgccacattatcgcgctttccagcgtggtggacctgttggtgcggcttcgg
gtgttggaagagactgatgtcagcgcgcactggaactttaaccaccccgctcaggattac
gctgtaccggctaaccgtaaactgtttcaccgctcgggccgttatatcacttcggcaggc
tttttggggacctatgacctgctcttgcatttgatcgccaagcagcatggctggtttctg
gctggcgaggtgtccgacaggatgatcaagggggaaatcaggtatgaagacgccccgcag
cgtcgccatatcaatcagcgtatccgtgcaaaacacaaagggctggccgctgcgattggt
ctgatcgaggagaaccttgagagcccggtcccgatttcggatcttgcccgtgcggcgggc
tacagcgtgcgccaattggaacgtgaatttagtaaatactatggcctgccgccggggcgc
tattacaagaatcgccgccttgaccgggccaaggcgcagatcgaacagactgcaatgcct
gtcattgaaatcgctttggccaacgggttcgagtcgacttcgcatttctcgaaatcgttt
tcacaacgctatggtcgcagcccgtatcggttgcgcaaaacgtgtcttggcaccccggta
gggcatgatgaccattag
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