Pseudohalocynthiibacter aestuariivivens: G5B38_08560
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Entry
G5B38_08560 CDS
T06463
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Pathway
paed00260
Glycine, serine and threonine metabolism
paed00630
Glyoxylate and dicarboxylate metabolism
paed00670
One carbon pool by folate
paed00785
Lipoic acid metabolism
paed01100
Metabolic pathways
paed01110
Biosynthesis of secondary metabolites
paed01200
Carbon metabolism
Module
paed_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
G5B38_08560 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
G5B38_08560 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
G5B38_08560 (gcvP)
00670 One carbon pool by folate
G5B38_08560 (gcvP)
Enzymes [BR:
paed01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
G5B38_08560 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
SepSecS
Motif
Other DBs
NCBI-ProteinID:
QIE45568
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All DBs
Position
complement(1791190..1794039)
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AA seq
949 aa
AA seq
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MAFEPIDYLPYDFANRRHIGPSPDEMAAMLEVLGVDSLDTLIDQTVPKSIRQEKPLDFGK
AKSERELLHHMRVTASKNKVLTSLIGQGYHGTVTPPAIQRNIFENPAWYTAYTPYQPEIS
QGRLEALLNFQTMVSDLTGLEIANASLLDESTACAEAMTMAQRVAKSKKTAFFVDRDCHP
QNIAVIQTRAAPLGIEVIVGNPDKMDASAVFGAIFQYPGTYGHVRDYTDHIARLHEADAI
GIVSADPLSLTLLKEPGAMNADIAVGSTQRFGIPLGYGGPHAAYMACRDAYKRAMPGRIV
GVSIDAHGNRAYRLSLQTREQHIRREKATSNVCTAQALLAVMASMYAVFHGPKGLKAIAQ
RIHRKTVRMAKGLEKAGFKVDPQSFFDTITVDVGPLQAAVMKSAVDEKINLRKVGETRVG
ITFDECTRPENVEAVWRAFGITEKDDKFEPEYRVPENMHRKTEYLTHPIFHMNRAETEMM
RYMRRLADRDLALDRAMIPLGSCTMKLNAAAEMMPVSWREFSRLHPFVPADQAEGYAELI
ADLSAKLCDITGYAAISMQPNSGAQGEYAGLLTIAAYHRAQDEGHRNVCLIPVSAHGTNP
ASAQMVGWKVVVVKSAENGDIDVDDFRAKAEKHAENLAACMITYPSTHGVFEETVRDVCK
ITHEHGGQVYIDGANMNAMVGLSRPGDLGGDVSHLNLHKTFCIPHGGGGPGMGPIGVKSH
LVEHLPGHPSTGGVQGPVSAAPFGSPSLLPISWAYCLMMGGEGLTQATRVAILNANYIAK
RLEGAYDVLYRGSEGRVAHECIIDTRPYADSAHVTVDDIAKRLVDCGFHAPTMSWPVSGT
LMIEPTESETKAELDRFCDAMLAIREEIRAIEEGKIDAENNPLKNAPHTMEDLVTDWDRP
YSREQGCFPPGAFRVDKYWPPVNRVDNVHGDRHLICTCPPLEDYAEAAE
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaaccaatcgactatctgccatatgattttgccaaccggcgtcacatcggg
ccgtcgcccgacgaaatggcggcgatgcttgaagtgcttggggtcgacagccttgatacg
ctgattgatcagacggtacccaaatccattcgtcaggaaaagccgctcgatttcggcaag
gcgaagtccgagcgcgaattgctgcaccacatgcgggtgacggcaagcaagaacaaggtg
ctgacatcgctgatcgggcagggctatcacggcacggtgacgccgcctgcgatccagagg
aatatctttgagaatccggcgtggtacaccgcctatacgccctatcagcccgaaatcagc
caaggtcggctggaggcgttgctgaacttccagacgatggtcagcgacttgaccggactg
gagatcgccaatgcgtcgctcttggatgaaagcacggcctgcgccgaggcgatgactatg
gcgcagcgggtggccaagtcgaaaaagaccgcgttctttgtcgaccgtgattgtcatcca
cagaacatcgcggtcattcagacccgcgccgccccgctggggatcgaggtgattgtcggc
aaccccgacaagatggacgcaagcgcagtctttggtgcgatttttcaatatcccggcacc
tacggccatgtgcgtgactataccgatcacatcgcgcggctgcacgaggccgacgccatc
ggtatcgtgagcgcagatccgttgtcgctgaccctgctcaaggaaccgggcgcgatgaat
gcggatatcgcggtgggcagcactcagcgtttcggcattccactgggctatggcggcccg
cacgcggcctatatggcctgtcgtgatgcctataaacgtgcgatgccgggccggatcgtc
ggggttagcatcgacgcgcatggcaaccgtgcctaccgtttgtcgctacaaacccgcgaa
cagcacattcgccgcgagaaagccaccagcaacgtctgtactgcgcaggctctgttggca
gtgatggcatcaatgtatgccgtgttccacggacccaagggcctgaaggccatcgcgcag
cgcatccaccgcaagacggtgcgtatggccaaggggctggagaaggctggtttcaaagtc
gatccgcaatccttttttgacacgataaccgtggatgttgggccgttgcaggcggcagtg
atgaaatcggccgtggacgaaaagatcaatctgcgcaaagtcggcgaaacccgcgttggc
atcacctttgacgaatgcacccggcccgagaatgtcgaggcagtctggcgcgcatttggt
atcactgagaaggatgacaagttcgagcccgaataccgggtccccgagaacatgcatcgc
aagactgagtacctcacgcacccgatctttcacatgaaccgggccgagaccgagatgatg
cgctatatgcgccgcctcgcggatcgtgatctggcgctggatcgggcaatgattccgctg
ggcagttgcaccatgaagctgaacgccgccgccgagatgatgccggtcagctggcgggaa
ttctcgcgtctgcatccgttcgtgcccgccgatcaggccgaagggtatgcagagttgatc
gcagacctcagcgccaagctgtgcgatatcaccggctatgcggcgatatcgatgcagcct
aactctggtgcgcagggcgaatacgcggggttgctgaccattgcggcctatcaccgcgcg
caggatgaagggcatcgcaatgtctgcctgattccggtcagtgcgcatggcaccaacccc
gccagcgcgcagatggtcggctggaaggtcgtcgtggtcaaatcggccgagaacggcgat
atcgacgtggacgatttccgtgccaaggcggaaaaacacgccgagaatctggccgcctgc
atgatcacctaccccagcacgcatggcgtgttcgaggaaacagtacgcgacgtgtgcaaa
atcacccatgagcatggcggtcaggtctatatcgacggggccaacatgaacgcgatggtc
ggcctcagtcgtcccggtgatctgggcggagatgtcagccaccttaacctgcacaagacg
ttctgtattccgcatggcggcggtggtcccggcatggggccaatcggcgtgaagtcgcat
ctggtcgaacacttgccgggccatcccagcacaggtggggtgcagggcccggtcagtgcg
gcaccgttcggttcgccatctctgctgccgatctcatgggcgtattgcctgatgatgggg
ggcgagggtctgacacaagcgacccgcgtggcgatcctgaatgccaactatatcgccaag
cggctggagggggcgtatgacgtgctctatcgcggcagtgagggtcgggtggcgcatgag
tgcatcatcgatacgcgcccctatgccgacagtgcgcatgtgacggtggatgacatcgcc
aagcggttggtcgattgcgggttccatgccccaacgatgagctggccggtgtcgggcaca
ctgatgattgagccgaccgagtccgaaaccaaggcagaactggatcggttctgtgatgcg
atgctggcgatccgcgaggaaattcgcgccatcgaggaaggcaagatcgacgcggagaat
aacccactgaagaatgcgccgcacacgatggaggatttggttaccgattgggaccggcca
tatagccgcgaacaggggtgtttcccgcccggtgcattccgcgtggacaaatattggccg
ccggtcaaccgcgttgacaatgtccacggcgatcgacacctgatctgtacgtgtcctccg
ttggaggattatgccgaagcggccgaataa
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