Pseudohalocynthiibacter aestuariivivens: G5B38_09640
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Entry
G5B38_09640 CDS
T06463
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Pathway
paed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G5B38_09640 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paed03400
]
G5B38_09640 (recF)
DNA repair and recombination proteins [BR:
paed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
G5B38_09640 (recF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
ABC_tran
AAA_15
AAA_29
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
QIE45764
LinkDB
All DBs
Position
complement(2019676..2020779)
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AA seq
367 aa
AA seq
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MAGLWFSQLTLSYFRSHKSAWLDVDARPVAIHGPNGAGKTNLIEAVSLFSPGRGLRRSSA
QEMARRPEALGWKLTGILHSLHQVHEIEIWSEEGGARQVRIDGKATAQLALGRIARVLWL
IPAMDRLWIEGAEGRRRFLDRMTMSFLPSHADAVLAYDKAMRERNRLLKDQVRDAHWYTA
LEGQMAERGAEIDAGRRAALAQIHAAQQAAETSFPVAELELTATEGEMPEDESAYRDALA
ESRFRDLVAGRTLIGPHRADLYGVYAAKGVPARDCSTGEQKALLVSLILANARGLMRDFG
APPILLLDEVAAHLDADRRAALYDEICGLGAQAWMTGTGAELFAELGNRAQHFVVTEAEN
VSQIDQR
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggccggtctgtggttttcccagctaacgctttcatattttcggtcgcataaatctgcg
tggctggacgttgatgcgcgcccggttgcaattcatggcccgaatggtgcgggtaagacc
aatctgatcgaggccgtttcgctgttttcgcccggtcgcgggctgcgccggtcctcggcg
caggagatggcgcgcagacccgaggcattgggctggaagctgacaggaatactacattcg
ttgcatcaggttcatgagattgaaatctggtccgaggaggggggcgcgcggcaagtgcgc
atcgacggcaaggcaacggcgcaactggcactcggacgcatcgcgcgggtgctatggctg
atccctgccatggatcgtctgtggatcgaaggggccgaagggcgtcggcgttttctggat
cggatgacgatgagttttcttcccagccatgctgacgccgtgctggcctatgacaaggcg
atgcgggaacgtaatcggctgttaaaggatcaggtgcgtgacgcacattggtacaccgcg
ctggaggggcaaatggccgagcgtggggccgagatcgatgcaggcagacgcgcggcgctg
gcgcagattcatgcggcacagcaggcggcagagacatcatttccggtggcagagttggag
ttgacggcaactgaaggtgaaatgccggaggatgaatctgcctaccgcgacgcgctggcg
gaaagccggtttcgtgatctggttgcgggcaggacgttgatcgggccacaccgtgccgac
ctatacggggtctatgcggccaagggtgtgccggctagggattgttcaaccggagagcag
aaggcgcttctcgtgtcgttgatcctggccaacgcgcgggggttgatgcgtgattttggt
gcaccgccgatcctgttgctggatgaggttgcggcgcatctggatgcggatcggcgtgcg
gcgctctatgatgaaatctgcggtctgggggcgcaggcctggatgacagggacgggggcg
gagctctttgctgagttgggcaatcgcgcgcagcatttcgttgtaactgaagcggagaat
gtatcgcagatcgatcagcggtga
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