Pseudohalocynthiibacter aestuariivivens: G5B38_09975
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Entry
G5B38_09975 CDS
T06463
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paed03000
]
G5B38_09975
Transcription factors [BR:
paed03000
]
Prokaryotic type
Helix-turn-helix
LacI family
G5B38_09975
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_1
LacI
Peripla_BP_3
Peripla_BP_4
Sigma54_DBD
HTH_23
Sigma70_r4
HTH_24
TrmB
HTH_IclR
HTH_3
HTH_10
SoxD
HNH_repeat
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QIE45826
LinkDB
All DBs
Position
2086710..2087735
Genome browser
AA seq
341 aa
AA seq
DB search
MSNQDNRPLTLRDVSEASGVSEMTVSRVLRNRGDVSDATRARVLASAKELGYVPNKIAGA
LASSRVNLVAVIIPSLSNLVFPEVMTGISDALDDTGLQPVVGVTGYSREKEEKVLYEMLS
WRPSGVIIAGLEHSEASRAMLKASGIPVVEIMDVDGTPVDSVVGISHRRAGEQMAREILR
SGYQRIGFLGTKMPRDHRARKRFEGFTEALAKAGVEIADQEFYEGGSALIKGREMTQDIL
KRDPELDFLYYSNDMIGAGGLLWLHEQGVDIPGQMGLAGFNGLNLLKGLPRQLATMDACR
NEIGRRAAEIISARVADDADPSPVRIALEPTISYGDTLRRP
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaatcaagacaaccgcccgctgaccctgcgcgacgtgtccgaagcatccggtgtg
tccgaaatgaccgtcagtcgcgttctgcgcaatcgcggcgatgtgtcggacgccacccgc
gcacgtgttctcgccagcgccaaggaactgggttacgtgcccaacaagatcgccggggca
ctggcgtccagccgggttaatctggttgccgtgatcatcccatccctgtcgaatctggtc
tttcccgaggtcatgactggcatcagcgacgcgctggacgacacaggactgcaaccggtt
gtcggcgtgaccgggtattcccgcgaaaaagaggaaaaagtcctctacgagatgctctct
tggcggccctccggcgtgatcatcgccggactggaacattccgaagcatcgcgcgcgatg
ctcaaggccagcgggatcccggtggtcgagatcatggatgtggatggcacacccgtggat
tcggtcgttggcatatcgcaccgtcgcgcaggcgaacagatggcgcgcgaaattctacgc
tccggctatcagcggatcggatttctgggcaccaagatgccgcgcgatcaccgggcccgc
aaacgcttcgaaggctttaccgaggcactggccaaggccggcgtcgagatcgcggatcag
gaattctacgaaggcggctctgccctgataaaaggacgcgagatgacccaagacattctc
aagcgcgacccggaactggattttctctattattctaacgatatgataggcgcgggcggc
ctgctttggctgcatgaacagggcgtggatattcccggtcagatgggattggctggtttc
aacgggctgaacctgctcaaaggattgccgcgccagttggcaacgatggacgcctgccgg
aacgaaattggccgccgcgcagccgagatcatatcggcacgggttgcggacgacgccgat
ccgtcaccggtccgcatcgcactggagccgaccatcagctatggcgacacgctgcgccgc
ccctag
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