Pseudohalocynthiibacter aestuariivivens: G5B38_10015
Help
Entry
G5B38_10015 CDS
T06463
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Pathway
paed00300
Lysine biosynthesis
paed00470
D-Amino acid metabolism
paed01100
Metabolic pathways
paed01110
Biosynthesis of secondary metabolites
paed01120
Microbial metabolism in diverse environments
paed01230
Biosynthesis of amino acids
Module
paed_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
G5B38_10015
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
G5B38_10015
Enzymes [BR:
paed01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
G5B38_10015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QIE45834
LinkDB
All DBs
Position
complement(2094264..2095097)
Genome browser
AA seq
277 aa
AA seq
DB search
MDTHADTSWPFMKMHGLGNDFVVVDARTRAFDVSPALAVAIGDRHRGIGFDQLAVISAGA
GDAHLTFYNSDGSTSAACGNATRCIARYLMDQNGKDALHLTTARGDLYARDAGDGLTSVN
MGAPQLNWRDIPLSEEMDTLELPIEGAPVATGMGNPHCTFFVEDAEAVSLQEFGGRYEHH
PLFPERTNVQVASLIGTDHLRMRVWERGVGVTLASGSSSCAVAVAAARRGLTGRAVRIDL
DGGTLMVDWRDDGVWMTGPTMHVADGVLTAAFIEAAR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggacacgcacgcagataccagttggccctttatgaagatgcatgggctgggcaacgac
tttgtcgtcgtcgatgcgcgtacgcgtgcgtttgatgtttcgccggcactggctgtggcg
attggtgatcggcatcgcggtatcgggttcgatcaactggcggtgatcagcgcgggggct
ggtgacgcgcatctgacgttttataactctgacggcagtacctctgcggcctgtggcaac
gcgacgcgctgtatcgcgcgctatctgatggatcagaatggcaaggatgcactgcacctg
acaactgcgcgtggtgatttgtatgctcgcgacgcaggggatgggctgacatccgtgaac
atgggcgcaccgcaactgaactggcgcgatattccgctgtccgaggagatggacacgctg
gagttgcccattgagggggcgccggtcgcgacgggtatgggcaatccgcattgcacattt
ttcgtcgaggatgccgaagctgtgtcattgcaagagttcggcggacgttatgagcatcat
ccgcttttccccgagcgcaccaatgtgcaggtcgcatcgctgatcgggactgatcatttg
cgtatgcgcgtgtgggaacgtggcgtcggcgtcacactggcatcggggtcgtcgtcctgt
gcggtggctgttgcggcggcacgacgcggtctgaccggccgcgcggtgcgaatcgatctg
gatggtggcacgctgatggtggattggcgcgacgacggtgtgtggatgacgggcccgacg
atgcatgtcgccgacggagtgctgacggcagcatttatcgaggccgcgcgatga
DBGET
integrated database retrieval system