Pseudohalocynthiibacter aestuariivivens: G5B38_11425
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Entry
G5B38_11425 CDS
T06463
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Pathway
paed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G5B38_11425 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paed03019
]
G5B38_11425 (pnp)
03016 Transfer RNA biogenesis [BR:
paed03016
]
G5B38_11425 (pnp)
Enzymes [BR:
paed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
G5B38_11425 (pnp)
Messenger RNA biogenesis [BR:
paed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G5B38_11425 (pnp)
Transfer RNA biogenesis [BR:
paed03016
]
Prokaryotic type
tRNA degradation factors
G5B38_11425 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
Motif
Other DBs
NCBI-ProteinID:
QIE46083
UniProt:
A0A6G6FIQ7
LinkDB
All DBs
Position
complement(2383908..2386040)
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AA seq
710 aa
AA seq
DB search
MFNEVKKSIEWGEETLTLETGKVARQADGSVIATLGETSVMANVTFAKQPKPGLDFFPLT
VHYQEKYYAAGKVPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKHETLVMCTVLSH
DLVNDPDMVAMIAASAALTISGAPFRGPIAGCRVGYEDGEYILNPTVDDMHELKNNPDQR
LDLVVAGTKDAVMMVESEAYELTEEEMLGAVNFAHEQIQPVVDLIIDLAESAAKEPFDFT
PPDYSELFAAVKAAGEDKVRAAYAITDKQERTTAVADAKAAIKESLSEEQLEDANLSAAL
KKLEATVLRGDVVKTGKRIDGRALDKVRDIVCETGLLPRTHGSALFTRGETQGLVVTTLG
TGDDEQFIDALHGNFKSNFLLHYNFPPYSVGEAGRVGPPGRREIGHGKLAWRALQAVLPA
ATDFPYTIRLVSEITESNGSSSMASICGGSLSMMDAGVPLKTAVAGVAMGLILEEDGSYA
VLTDILGDEDHLGDMDFKVAGTENGITSLQMDIKVAGITPEIMQKALAQAKEGRMHILGE
MNKALTGAQEFSVHAPRIETMQIPTDKIREVIGSGGKVIREIVEVSGAKVDINDEGIIKI
ASPNGDSIKKAYDMIHSIVAEPEEGAIYTGTVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVKVKLLGFDDRGKVRLSMKVVDQETGEEVAPEKKDD
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacgaagttaaaaaatcaatcgagtggggcgaagaaaccctgactctcgaaacg
ggcaaggtcgcccgtcaggcagacggttccgtgattgccacgctgggtgaaaccagtgtc
atggccaacgtgacctttgccaagcagccgaaaccgggattggatttcttcccgctgacg
gttcactaccaagagaaatattatgcagccggcaaagtgcccggtggtttctttaagcgc
gaagcgcgtcccacggaaaaagagacgctgaccgcgcgtctgatcgaccgcccgatccgc
ccgctgtttgtcccgggtttcaagcatgaaacactggtgatgtgcaccgtgctgagccac
gatctcgtcaatgacccggacatggtggcgatgatcgcggcctctgccgcactgaccatt
tccggcgcgccgttccgtgggccgatcgccggttgccgcgtggggtatgaggatggcgaa
tacatcctgaatccgaccgtggatgacatgcacgagctgaaaaacaaccccgatcaacgt
cttgatctggttgttgccggcaccaaagacgccgtgatgatggtcgagtccgaagcctat
gagctgaccgaagaagagatgctgggcgctgtcaactttgcgcatgagcaaattcagcca
gtggtcgacctgatcattgatctggcggaatcggcggcaaaagagccgttcgactttact
ccaccggattactcggaactctttgcagcggtgaaagcagcaggcgaggacaaggttcgc
gcagcctatgcgatcactgacaagcaggaacgcacgaccgcagttgccgacgccaaggct
gcgatcaaggaatcgctgagcgaagaacagctagaggatgccaatctgagcgcagccctg
aagaagctggaagcgactgttctgcggggcgacgttgtgaaaaccggcaagcggattgat
ggccgggcattggacaaggtgcgcgatatcgtttgcgaaaccggtctgctgccacgtacc
cacggttcggcgctgttcacccgtggtgaaacgcagggtctggtcgtgaccacactgggc
accggcgatgatgagcaattcatcgatgcgctgcatggcaactttaaatcgaacttcctg
ctgcattacaacttccccccctattcggttggcgaagcgggtcgcgtgggccctccgggt
cgtcgcgaaatcggccacggcaagctggcatggcgcgcgcttcaggcggttctgcctgcg
gcgacggatttcccctacaccattcgtctggttagcgagatcaccgaatccaacggctca
tcctcgatggcgtcgatttgtggtggatcgctgtcgatgatggacgctggcgtgccgctg
aaaacggcggttgccggtgtggcgatgggcctgattctggaagaagacggatcctatgcg
gttctgaccgatatccttggcgacgaagatcacctcggcgacatggatttcaaagtggcg
ggtaccgaaaacggcatcacctcgttgcagatggatatcaaggtcgcgggcatcacgccc
gaaatcatgcaaaaggcactggcgcaagccaaggaaggccggatgcatatcctgggtgag
atgaacaaagccctgaccggcgcgcaggaattctcggttcacgcgccgcgtatcgagacg
atgcagatccccacggacaaaatccgtgaggtcatcggctcgggcggcaaggtcatccgc
gaaatcgtcgaagtgtcgggcgccaaggtcgatatcaacgacgaaggcatcatcaagatc
gcgtcgcccaacggcgattcgatcaagaaagcctatgacatgatccactcgatcgtggca
gagccggaagaaggcgcgatttacactggtacggtcgtcaagatcgtcgatttcggtgca
ttcgtgaacttctttggcaagcgcgacggtctggtgcatgtcagccaaatcgaaaaccgc
cgcctgaatcatccgtcagatgttctgaaagaaggtcaggaagtgaaggtcaagctgctg
ggctttgacgatcgcggcaaggtgcgcctgtcgatgaaagtagtcgatcaggaaaccggc
gaagaagttgcgccggaaaagaaagacgactga
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