Pseudohalocynthiibacter aestuariivivens: G5B38_11470
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Entry
G5B38_11470 CDS
T06463
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paed03016
]
G5B38_11470 (truB)
Enzymes [BR:
paed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
G5B38_11470 (truB)
Transfer RNA biogenesis [BR:
paed03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
G5B38_11470 (truB)
Prokaryotic type
G5B38_11470 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QIE47539
LinkDB
All DBs
Position
complement(2393326..2394252)
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AA seq
308 aa
AA seq
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MARKRKGRDISGWLVVDKPAGPTSTAVVNKVRWALQAKKAGHAGTLDPEATGVLAVALGE
ATKTVPFVTDALKAYRFAVRFGQATNTDDAEGEVIAQSDARPSDEEIKEALGSFIGDIMQ
VPPKFSAVKIDGQRAYKLARDGEDVEIAARPLWVEELVLTDRPDADTAVLEMTCGKGGYV
RAIARDLGAALGCHGHVTWLRRLWSGPFDVEDGVTLEQVEALAQDPALDAHLLPLEVGLS
ELPELRSTPDGAAKLRNGNPGMVHPGDAEYGDECWASLDGRAVAVGTYKAGMLHPSRVFV
APQGEGSQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaaacgcaaggggcgcgacatttccggctggttggtggtggacaagcccgcc
ggcccgacgtcgactgccgtggtgaacaaggtgcgttgggcattgcaggccaaaaaagca
ggccatgccggcacgctagatcccgaggcgaccggagtgttggccgttgcgctgggcgag
gcgaccaaaaccgtgccgtttgtaacggatgcgctaaaggcctatcgattcgccgtacgg
ttcggacaggccaccaatacagatgacgccgagggcgaggtcatcgcgcagagcgatgcg
cgcccctcggatgaagagatcaaggaagctttgggttcctttatcggtgacatcatgcaa
gtgccgcccaagttctcggccgtaaagattgacggccaacgcgcctacaaattggcgcgt
gatggcgaagatgtagagatcgctgcgcgcccgctatgggtggaagagctggttctgacg
gatcggcctgacgcagataccgccgtgttagagatgacctgtggcaagggcggctatgtg
cgcgccattgcgcgcgatctgggcgcggcgctggggtgtcatgggcatgtgacatggttg
cggcggctctggtccggaccattcgacgtcgaggatggtgtcacgctggagcaggtcgag
gcattggcgcaggatccggcgctggatgcgcacctgctgccattggaggtcgggctgagt
gaactgccggagttgcgttctacgcctgatggtgcggcaaagctgcgcaacggcaatcct
ggcatggttcatccgggagatgcagaatacggtgatgaatgttgggcgtcgctggatggg
cgtgctgtggctgtgggtacatacaaggccggtatgttgcatcccagccgggtcttcgtc
gcgccgcagggcgagggatcgcaatag
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