Pseudohalocynthiibacter aestuariivivens: G5B38_11700
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Entry
G5B38_11700 CDS
T06463
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Pathway
paed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G5B38_11700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paed03019
]
G5B38_11700
Enzymes [BR:
paed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
G5B38_11700
Messenger RNA biogenesis [BR:
paed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
G5B38_11700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QIE46132
LinkDB
All DBs
Position
complement(2441315..2442472)
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AA seq
385 aa
AA seq
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MKITGDWLHAPHLQSVFKLIAAGGFSAYLVGGSVRDAVLGRSVGDLDLATDARPDQVIAL
AKAADVRCVPTGLDHGTVTLVVQGVPHEITSFRRDVETDGRHARVAFTDDIAEDARRRDF
TMNALYAGADGTVIDPLGGLADALAGRVRFVEDAERRICEDYLRILRFFRFYAWFGGQDG
IDAEGLAAAARHQDGLDGIARERVGQEMRKLLLASDPTPAIAAMQSSGILARILPGSDNS
ALGLLVHLEGEYDVPPCAMRRLAALGGTSVPDQLRLSNAEAARLAMLRDAVGGEGGPGVF
GYRHGYDMARDVLLLRAALLETPVPDGALAAAKEGAEASFPIKAADLMPTFTGPALGAEL
KELESRWVASGFTLSKNDLLKDVQR
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcactggcgactggctacatgcgccgcacctgcaatcggtgttcaaattgatc
gcggcaggcggattttctgcctatctggtcggcggttccgtgcgtgacgcggtgttgggc
cggtctgtgggtgatctggatctggccacggatgcgcgcccggatcaggtgatcgctttg
gccaaggccgcagatgtgcgctgtgtgccgacggggctggatcatggaactgtgacactg
gtggtgcagggtgttccgcacgaaattaccagctttcgccgtgatgtagaaacagatggg
cggcacgcgcgggtcgcgtttaccgatgacatagccgaggatgcacgccgccgcgatttc
acgatgaacgcgctttatgccggtgccgatggtacagtgatcgaccctctgggtgggtta
gcggacgcattggcgggccgggtgcggttcgtagaggacgccgaacgccggatttgcgag
gattatttgcgcatcctgcggtttttccgattctatgcgtggttcggtgggcaggacgga
atcgatgccgaagggctggcagccgcggcacggcatcaggatgggttggacggaatcgcc
cgcgagagggtcgggcaggaaatgcgcaaactgctgttggcatccgatcccacgcccgcc
atcgctgccatgcagagcagtggtattctggcccgcattttgccgggcagcgacaatagc
gcgctgggcctgcttgtgcatcttgaaggggaatacgatgtgcccccctgtgcgatgcgg
cgacttgcggcactgggcggcacatcggtgccggaccaactgcgcctgagcaatgccgag
gcggcgcgactggccatgctgcgtgatgcagtgggtggcgagggcgggccgggcgtattc
ggttacaggcatggctatgatatggcgcgtgatgttttgctcttgcgggcggcattgcta
gagacgcctgtgcccgacggggcgctggcagcggcaaaagagggagcagaagccagcttt
ccgatcaaggccgcagatttgatgccgaccttcaccggccccgcgctgggcgccgaactg
aaagaactggaaagccgatgggtcgcctcgggcttcacattaagcaagaacgacctgctg
aaggacgtgcaaagatga
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