Pseudohalocynthiibacter aestuariivivens: G5B38_11915
Help
Entry
G5B38_11915 CDS
T06463
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paed03400
]
G5B38_11915 (addA)
Enzymes [BR:
paed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5B38_11915 (addA)
DNA repair and recombination proteins [BR:
paed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
G5B38_11915 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
DEAD
DUF3638
Motif
Other DBs
NCBI-ProteinID:
QIE46173
LinkDB
All DBs
Position
complement(2483338..2486718)
Genome browser
AA seq
1126 aa
AA seq
DB search
MTRDAATQRQIAAARPDRSTWLAANAGSGKTKVLTDRVARLLLDGVDPQHILCLTYTKAA
ASEMQNRLFRRLGKWAMLGDAQLTTELNDLGLDGPLPDEALRNARRLFAMAVETPGGLKI
QTIHSFCAGLLRRFPLEAGVSPNFSEMEDRAAALLRAEIVEGIAAGPEADKLAAVARHYS
GDSIADLAQEIAGKQSLFQHKWTDAGLRRVLGLRDHQTRDWLRDSVYLGGEQEILATLLP
ALRAGTTTDQKNADKLAAINTLDLAALPILEGVFLSGKGTDPPFAAKIGTRQDFPTKKTT
QALGDTAAPLHEWMRRVETARETRVALDALDAAHALHDFAHAFLAAYAEAKQRHSWLDFD
DLILKAVNLLTRRDVAAWVLFRLDGGIDHILLDEAQDTSPEQWQVIARLAQEFTSGIGSR
PNDRRTIFVVGDKKQSIYSFQGADPREFDRMQAEFAERLGATPDPLQSHRLEHSFRSSQV
ILDLVDQVFAKVVQPEGLSLDAHHLAFKTDLPGRVDLWPVPEPEQAIDDPAWHDPVDVVA
GNDPAVSLAAQIAQSISDMIDTGQPIPTGKGTTMRPVRAGDVLILVQGRSQLFHEIIRAC
KARNLPIAGADRLRVAGELAVRDLAALLSFLATPEDSLALATALRSPLFGWSETQLHALA
QPRTQPYLWPALRLRADEFPETMTILNDLRAQVDYLRPYDLIERILTRHSGRRRLLSRLG
PEAEDGIDALLSQALAYEQKAVDSLTGFLVWLETDDLEIKRQMDSAGNRIRVMTVHGAKG
LESPIVILPDTGERNTPMRGQITVSDDIPLWRLTADNVPARIRDAVDLAKSAEEAERDRL
LYVAMTRAETWLIVACAKPPGKNGKSWYEKIAAGMTASGAFSYSFDDADGLRLETGNWAA
TETVVEPETTIVTAELPAFYGDPVSEIPSRPTALSPSDLGGAKALPGEAGLDEDAAKRWG
RQVHLLLEVLPDVPHDIWPAIAAQLLSTGPDRADATTQAALLSEVENVLTATDLTVLFQP
AALVEVPITASLPELGGRRLHGIIDRMILGTDRILIVDFKTNRVVPDSPAACPIGLLRQM
GAYAAAVRQIYPGKPVDTALLWTRTAQMMMLPHDLVTEAVTTTSIP
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcgacgccgctacacagcgccagatcgctgccgcccggcctgaccgatctact
tggttggcggccaacgctggatcgggcaaaaccaaggtactgaccgaccgcgtggcgcgg
ctattgctggatggtgtcgatccgcagcatatcctatgtctgacctacaccaaggccgcc
gcaagcgagatgcaaaaccgactgtttcgacgtttggggaaatgggcgatgctgggggat
gcccagctaaccaccgagctgaatgacctcgggttggatgggccactgccagacgaggcg
ctgcgcaatgcgcggcgtctgttcgccatggcagtcgaaacgccgggcggattgaaaatc
cagaccatccactcgttctgtgcgggccttttgcgtcgttttccactagaggccggtgtc
agcccgaatttctccgagatggaagatcgcgcggcagccttgttgcgggcggaaatcgtt
gaagggatcgccgccgggccggaggccgacaagctggcagccgtggcgcgacactatagc
ggtgatagtatcgccgatttggcacaggagattgctggaaaacagagcctgttccagcat
aaatggaccgacgcggggcttcgtcgtgtactgggcctacgcgaccaccaaacccgagac
tggctgcgcgattctgtctatctgggtggcgaacaggaaattctggccactctgctgcct
gcgttgcgggccggtacgaccaccgatcagaaaaatgccgacaaactggcggcgatcaac
acgcttgatttggcggcactgccgatcctcgagggagtttttctgtcaggcaagggaacc
gatccgccctttgccgccaagattggcacacgtcaggacttcccgaccaagaaaaccaca
caggcgcttggcgatactgctgcaccactacatgagtggatgcgccgggtcgaaacagca
agggagacgcgcgttgccctcgacgcgctcgacgcagcccacgcgctgcacgattttgct
catgcgtttctggccgcctatgcggaggccaaacagcggcacagttggctagactttgat
gatctgatcctgaaggcggtcaacctgctgacacgtcgagatgtcgccgcgtgggtatta
ttccgtttggatggaggcatagaccatatcctgctggatgaggcacaggataccagcccg
gaacaatggcaagtcattgcgcgtctggcgcaggagtttaccagcggcatcggatcgcgc
cctaacgaccggcgaacgatctttgtcgtaggggacaagaaacagtcgatctattccttt
cagggggccgacccgcgcgagtttgaccggatgcaagccgagtttgccgaacggttgggg
gccacgccggatccgctgcaatcgcatcggctggaacattcattccgctcttcacaggtg
atcctcgatctggtcgatcaggtattcgcaaaggtcgttcaacccgaaggactatcgctt
gacgcacaccatctggcgttcaagaccgatttgcccggtcgcgttgatctatggcccgtg
cccgaaccagaacaggccatcgacgatcctgcatggcatgatccggtcgatgtggtcgct
ggcaacgatccggctgtatctctggcggcccaaatagcacaaagtatttcagatatgatc
gacacggggcagcccatcccgaccggcaaaggcacgacgatgcgcccggtccgggcaggt
gatgtgctgatccttgttcagggacgttcacagctatttcacgagattattcgcgcctgc
aaggcccgcaacctgcccatcgccggcgcggacagactgcgggtagcgggtgaactggcc
gtgcgcgatttggcggcattgctgtcgtttcttgctacacccgaggacagtctggcgctc
gccaccgcattgcgctcgccactctttggctggagcgagacgcaattgcacgcattggcg
cagccgcgcacgcagccctatttatggccagcattgcgcctgcgcgcagatgaattcccc
gaaacgatgacaatcctcaatgatctacgcgcccaagtggattatctgcgcccctatgac
ctgatcgaacgtatcctgacacgccattcgggccgacgcaggctgttgtcgcgcctcgga
cctgaggccgaagatggcatcgacgcgctgctcagtcaggccctcgcctacgaacaaaag
gccgtggacagcttgacgggctttctggtctggctggaaaccgatgatcttgaaataaaa
cgtcagatggacagcgcaggaaaccgcattcgggtgatgacggtccatggcgcaaaaggg
ctggagtcaccgattgtcatcctgccggatacgggcgaacgcaacacgccgatgcgcggc
cagatcacggtatctgacgacatccccctctggcgtttgacagccgataacgtccccgcc
cggatacgcgacgctgttgatctggcaaaatcagcagaagaagccgagcgtgatcgcctg
ctctatgtggccatgacacgggcagaaacctggctgattgtcgcctgcgccaagccaccg
ggcaagaacggcaagagctggtacgagaagattgccgctggaatgaccgcaagcggagct
ttttcctacagctttgatgatgcggatggattgcgtctggaaacagggaattgggctgca
acagagactgttgttgaacctgaaacgacaattgtcaccgccgagttgcctgcattttac
ggcgatcctgtttccgagattccgtcgcgacccaccgcccttagcccatctgatctgggc
ggggccaaagctctgcccggcgaggctgggctggacgaggacgccgccaaacgctggggc
cgccaggtacatctgctgctagaggttctgccagacgtgccgcatgacatatggcccgca
attgcggcgcaattgctgagcaccggaccggaccgggctgatgccacgacgcaagcggcc
ctcctgtcggaagtggaaaacgtgctgacagccacggatttgaccgtgctgtttcagcct
gccgcgctggtcgaagtgccgattaccgcatcgctgccggagttgggcggcagaaggctg
catggtattattgaccggatgattctgggcaccgatcgcattctgatcgtcgatttcaaa
acaaaccgcgttgtgcctgacagcccggcggcctgccccattggtctgctgcggcaaatg
ggggcctatgccgcagcggtacggcagatctatcccggtaagcccgtcgataccgcatta
ttgtggacgcgcacagcacagatgatgatgctcccacacgatctagtaacagaagccgtc
acgaccacttcaataccttga
DBGET
integrated database retrieval system
