Pseudohalocynthiibacter aestuariivivens: G5B38_12890
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Entry
G5B38_12890 CDS
T06463
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Pathway
paed02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G5B38_12890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paed02000
]
G5B38_12890
Transporters [BR:
paed02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
G5B38_12890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
nSTAND_NTPase5
SMC_N
AAA_25
nSTAND3
AAA_33
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
QIE46347
LinkDB
All DBs
Position
2701955..2703055
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AA seq
366 aa
AA seq
DB search
MADKNNDDAFVEFERVQKSYDGEILVVKDLNLTVPRGEFLTMLGPSGSGKTTCLMMLAGF
ETATHGDIRLGGTSINNIPPHKRGIGMVFQNYALFPHMTIAENLSFPLEVRKMGKSDREA
KVKRALEMVEMGAFGGRRPAQLSGGQQQRVALARALVFEPELVLMDEPLGALDKQLREKM
QFEITDLAHNLGITTVYVTHDQTEALTMSDRVAVFDDGRIQQIDPPDKLYEEPDNSFVAQ
FIGENNTMLGTLKEIKDGTALVELDGGALIDAKPVNVSEVGARTRVSIRPERVEIDKKRL
KPGAHTLKAEVLEFIYMGDIFRTRLRVAGNDEFIVKTRNAPDQRRMQPGEQIEIGWLPED
CRALDA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
ttggcggataaaaacaacgatgatgcgttcgtcgaatttgaacgcgtgcaaaagagttat
gatggcgaaattctcgttgtcaaagatctgaacctgacggtgccgcgcggcgaattcctg
acgatgttgggcccctcgggatcgggcaagaccacatgcctgatgatgctcgctgggttc
gaaaccgcaacacatggcgatattcgtctcggtggcacgtcgatcaataacatcccacca
cacaagcgcggcatcggcatggtgttccagaactacgctctgttcccgcacatgacgatt
gcagagaacctcagcttcccgcttgaggtacgcaagatgggtaagtcggaccgcgaggcc
aaagtcaaacgtgcgctggaaatggtcgagatgggcgcctttggcggtcgccgcccggca
cagctctcgggtggtcagcaacaacgggtcgccttggcgcgcgcgcttgtgtttgaacct
gaactggtcctgatggacgagccgctcggcgcgctggacaaacaactgcgcgaaaagatg
cagttcgagattaccgatctggcacacaatctgggaattaccacggtctatgtgacccac
gaccagacagaggcgttgaccatgtctgatcgtgtcgcagtgttcgacgatggccggatt
cagcagatcgacccgccggacaagctttatgaagagccggacaacagtttcgtcgcgcaa
ttcatcggcgaaaacaacacaatgctgggcacgctcaaagagatcaaagacggcacggcg
ttggttgaactggacggcggcgcactgatcgatgccaaaccggtgaatgtcagcgaagtc
ggtgcgcgcacccgcgtatccatccggccggaacgtgttgaaatagacaagaaacggcta
aagcctggcgcacacaccctaaaagcggaagtgctggaattcatctatatgggtgacatt
ttccgcacgcgcctgcgcgtcgccggcaatgatgagtttatcgtcaagacccgtaacgca
cccgaccagcggcgcatgcagcccggcgagcagatcgagatcggctggcttccagaggat
tgccgcgcgctggatgcgtaa
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