Pseudohalocynthiibacter aestuariivivens: G5B38_13735
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Entry
G5B38_13735 CDS
T06463
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Pathway
paed03030
DNA replication
paed03410
Base excision repair
paed03420
Nucleotide excision repair
paed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G5B38_13735 (polA)
03410 Base excision repair
G5B38_13735 (polA)
03420 Nucleotide excision repair
G5B38_13735 (polA)
03440 Homologous recombination
G5B38_13735 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paed03032
]
G5B38_13735 (polA)
03400 DNA repair and recombination proteins [BR:
paed03400
]
G5B38_13735 (polA)
Enzymes [BR:
paed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G5B38_13735 (polA)
DNA replication proteins [BR:
paed03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G5B38_13735 (polA)
DNA repair and recombination proteins [BR:
paed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
G5B38_13735 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G5B38_13735 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QIE46496
LinkDB
All DBs
Position
complement(2871018..2873813)
Genome browser
AA seq
931 aa
AA seq
DB search
MSFGKGHHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVAGFCNMLQRYIDDNAGPDAP
THVAVIFDKGSHTFRNDLYPEYKANREAMPEDLRPQMPLTRRATEAFNIACKEIEGYEAD
DIIATLSCQARDAGGRVTIISSDKDLMQLVGGGVEMLDAMKNKRIDVEGVEEKFGVGPDR
VVDVQALAGDSVDNVPGAPGIGIKTAALLINEYGDLDTLLERAGEIKQPKRRETLIEKAD
QIRLSRQLVQLDCATPLDFGLDDLEVRDAEPDVLLAFLAEMEFRTLTKRVAEAMDAEPPV
IADNPQQGAKEAAPEWPAIAPESYEKVTDMAALQVWIDRIMARGYVAVDTETTSLNEMQA
DLVGISLAVVPGQACYIPLTHKEGGADDLFGSDKLAEDQLGLEAVLAALKPLLEDASILK
IGQNMKYDAKIFAGHGITVAPVDDTMLMSYALNAGLHNHGMDTLADRYLGHTPIPIKSLL
GTGKSAITFDRVPVDEAVGYAAEDADITLRLWHTFKPMLHREAVTTVYETLERPLVPVLA
QMERNGILVDRDVLSRMSNAFAQKMAGLEAEIHELAGRSFNVGSPKQLGEILFDEMALEG
GKKGKTGAYATGADVLEDLATEHELPARVLDWRQLSKLKSTYTDALQDHIDPDTGRVHTS
YVQTGASTGRLASTDPNLQNIPVRTEEGRRIREAFIAPEGRTLVSLDYSQIELRILAHVA
DIAALKDAFRDGQDIHAMTASEMFDVPMDEMTPEVRRRAKAINFGVIYGISGFGLARNLR
IPRAEAQGFIDRYFERFPGIRTYMDATVEFAKEHGHVQTLFGRKIHTPEIAAKGPRAGFA
KRAAINAPIQGTAADVIRRAMIRMPAAIAGLPCRMLLQVHDELLFEVDKDAVDDVIAAAR
EVMEGASDPAVRLDVPLIVDAGQGANWAEAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcggaaaaggccatcacctgcacctgatcgacggctctgccttcatctttcgc
gcgtatcatgcgttgccgccgctgacgcgcaaatcggacgggctgcccatcggtgcggtc
gccgggttctgcaacatgctgcaacgctatattgatgataatgcggggccggatgcgcca
acacatgtggcagttatctttgataagggcagtcacacgttccgcaatgacctttatccc
gagtacaaggccaaccgcgaggcaatgccagaggatctgcgcccgcagatgccgctgacg
cggcgcgcgacagaagcgttcaacatcgcctgcaaggaaatcgaaggttatgaggcagac
gacatcatcgcaacgctcagctgtcaggcgcgtgacgccggcgggcgggtgacgatcatc
agctcggacaaggatctgatgcagttggttggcggcggcgtcgagatgctggatgcgatg
aagaacaagcgcattgatgtggaaggtgtcgaagaaaagtttggcgttggccccgaccgg
gtggtggacgtgcaggcgctggccggcgattcggtcgataacgttcccggtgcgccgggg
attgggatcaagaccgccgcattgctgatcaacgaatacggcgatctggacacattgctg
gaacgcgcaggcgagatcaagcagccaaagcgccgcgagacgctgatcgagaaggccgac
cagatccggctgtcgcgccaattggtgcagttggattgtgccacgccgctggatttcggg
ctggacgatctggaagtgcgcgacgcggagccggatgtattgctggcgtttctggccgag
atggagtttcggacactaaccaagcgtgtcgccgaagcgatggacgcagaaccgccggtt
attgccgacaacccacagcaaggggcgaaagaggccgcacccgaatggcccgcgattgcg
cctgagagctatgaaaaggttaccgatatggcggcgttacaggtctggatcgaccggatt
atggcgcgtggatatgtggcggtggataccgagacgacgtcactcaatgaaatgcaggcc
gatctggtcgggatcagtctggccgtggtgccgggacaggcctgttacatcccgttgact
cacaaggaaggcggggcggatgatctctttggctcggacaagctggctgaggaccagcta
ggtctggaggccgtgctggcggcactgaagccgctgctggaggatgccagcatcctcaag
atcggccagaacatgaaatacgacgccaagatttttgccggtcacgggatcactgttgcc
cccgtcgacgacacgatgttgatgtcttatgcgctgaatgccgggttgcacaatcatggc
atggacacccttgcagatcgctatctgggacatacgcccatcccgatcaaatcactgctg
ggcaccggtaaatccgcgatcacctttgaccgcgtaccagtggacgaggcagtgggttac
gctgccgaggatgccgacatcaccttgcgcctgtggcacacgttcaaaccgatgctgcac
cgcgaagcggtcacaactgtctatgaaacgctagagcgcccgctggtgccggtgctggcc
cagatggagcgcaacggaatactggtggatcgcgacgttctcagccggatgtccaatgcc
tttgcccagaaaatggcagggctggaggccgagatacacgagctggccggtcgcagtttc
aacgtcggatcacccaagcaactgggtgaaatcctgttcgacgaaatggcgctggaaggc
ggcaaaaagggcaaaaccggcgcctatgccactggtgcggacgtgctggaggatctcgcg
actgagcatgagttgcccgcacgggtgctggactggcgacagttgagcaagctgaaatcg
acctacacagacgcgttgcaggatcatatcgacccggacaccgggcgcgtgcacacgtcc
tatgttcagaccggggccagcaccggacggctggcatcgaccgatcccaacttgcaaaac
attccggtgcgcaccgaggaaggacgccgtattcgcgaggcgttcattgcccccgaaggg
cgaacactggtcagtctcgactacagccagatcgaactgcgcattctggcgcatgtggcc
gatattgccgcgctcaaggatgctttccgcgacggtcaggacattcacgccatgactgca
tcggagatgttcgatgtgccgatggacgaaatgacaccagaggtgcggcgtcgcgccaag
gcgatcaactttggcgtcatctacgggatttccggctttggccttgctcgcaatctgcgg
attccacgggccgaggcgcaggggttcatcgaccggtatttcgagcggttccccggtatc
cggacgtatatggacgcgacggtggaattcgccaaggaacacggccatgtgcagaccctc
tttggccgcaagatccacacgcccgagattgccgccaaagggccacgcgccgggttcgcc
aaacgcgccgcgatcaacgcgccgatccaaggtaccgctgccgatgttatacgccgtgca
atgatccgcatgcctgccgcgattgcgggattgccctgccgtatgctgctacaagtgcat
gacgaattgctgttcgaggtcgacaaggacgctgtggacgacgtgattgccgccgcgcga
gaagtgatggagggcgcatctgaccctgctgtgcgtctggatgtgccgctgatcgttgat
gccggacaaggagccaactgggccgaggcacactag
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