Pseudohalocynthiibacter aestuariivivens: G5B38_15080
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Entry
G5B38_15080 CDS
T06463
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Pathway
paed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G5B38_15080 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paed03400
]
G5B38_15080 (ruvB)
Enzymes [BR:
paed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5B38_15080 (ruvB)
DNA repair and recombination proteins [BR:
paed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G5B38_15080 (ruvB)
RecFOR pathway proteins
G5B38_15080 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
Mg_chelatase
AAA_22
AAA_2
AAA_14
AAA_33
TsaE
AAA_3
Rad17
RNA_helicase
nSTAND3
AAA_17
AAA_18
AAA_28
ABC_tran
NACHT
NB-ARC
AAA_24
Parvo_NS1
AAA_11
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QIE46739
LinkDB
All DBs
Position
3140695..3141723
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AA seq
342 aa
AA seq
DB search
MSEPDPTLRPEPLPEDQSRSLRPQALSEFIGQAEARANLRVFIQSARQRGEAMDHTLFHG
PPGLGKTTLAQIMARELGVGFRMTSGPVLAKAGDLAAILTNLEPRDVLFIDEIHRLNPAV
EEVLYPALEDFELDLVIGEGPAARTVRIELQPFTLVGATTRLGLLTTPLRDRFGIPTRLQ
FYEIEELHEIVVRNAALLNVPCASDGAMEIARRARGTPRIAGRLLRRVVDFALIDGDGTI
TRALADAALTRLGVDHLGLDGADRRYLRLIAEAYQGGPVGIETMSAALSESRDALEEVIE
PYLLQQGLIQRTPRGRMLALRAWAHLGLAAPRAVGQNDLFEG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcctgatcctacattgcgccccgagccgctgcccgaggaccaaagccgcagc
ttgcgcccgcaggccttgagcgagttcatcggtcaggcggaggcgcgggccaatctgcgc
gtgtttatccagtctgcccgccaacgtggcgaggcaatggaccatacactgtttcatggg
cctccgggtttgggcaaaacaacgctggcgcagatcatggcgcgcgagttgggtgtcggg
tttcgtatgacatccgggccggtattggccaaagcgggtgatctggcggcgatcctgact
aatctggagccgcgcgatgtgttgtttatcgatgaaatccaccgacttaatccggcggtg
gaagaagtgctttacccggcattggaagattttgaactggatctggtgatcggcgagggg
cccgccgcacgcaccgtaaggatagaattgcagccttttacgctggtcggtgcgacgacg
cgattgggactgttgacgacgccgctgcgggatcggtttggcatcccgacgcggttgcag
ttttacgagatcgaggaattgcacgagatcgtggtgcgcaacgccgcattgctgaacgtg
ccgtgcgcatccgatggcgcgatggagatcgcgcgccgagcccgtggcacgccgcgcatc
gctgggcggttgttgcgtcgggttgtggattttgccctgatcgacggcgacggcacaatc
acccgcgcgctggccgatgcggcattgacccggctgggcgtagatcatctgggccttgat
ggggcagaccggcgctatctgcgactgatcgccgaggcctatcagggcggtccggtcggg
attgagacgatgagtgccgcgctgagcgagtcccgtgatgcgttggaagaggtgatcgag
ccgtatctgttgcagcaagggctgatccagcgcacgccccgcgggcggatgctggcgctg
cgggcgtgggcgcatctggggctggcagcaccgcgcgccgtgggccagaatgacctgttt
gagggatag
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