Pseudohalocynthiibacter aestuariivivens: G5B38_17320
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Entry
G5B38_17320 CDS
T06463
Name
(GenBank) TRAP transporter small permease subunit
KO
K11689
TRAP-type transport system small permease protein
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Pathway
paed02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G5B38_17320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paed02000
]
G5B38_17320
Transporters [BR:
paed02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
G5B38_17320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctQ
NfeD_TM
Motif
Other DBs
NCBI-ProteinID:
QIE47143
LinkDB
All DBs
Position
complement(3564213..3564752)
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AA seq
179 aa
AA seq
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MSAGTGMKSLGDTMLNALAVLVIALMLCVVLQVACSFFDINPLISFENRVGFFGKGITLN
SLLDLQWHLFALICLVPSGAVLIRDTHVRVDFLYDRLGPNARRGIDGVGHVVFALPFFVM
ALPAAWDFAMRAYRSGEGSRNGGLDDLWIIKLVLPVGLGLLAVAIVWETGRLIRGNRAT
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccggaacggggatgaaatcactgggcgacacaatgctgaacgcattggccgtg
cttgtgattgcactgatgctctgcgtggttcttcaagttgcgtgcagcttttttgacata
aacccactgatatcgtttgaaaaccgcgttggctttttcggcaaggggatcactctgaat
tcactgcttgatctgcaatggcatctctttgcgctgatctgcctcgtgccgtctggcgcc
gtcctgatccgtgacacccatgtccgcgtggatttcctctatgatcgtcttgggccaaat
gcacgccgtggcatcgacggggttggccacgtggtctttgccctgcccttctttgtcatg
gctctgcctgcagcgtgggatttcgcaatgcgcgcctatcgttccggcgaaggctcgcgc
aatggcgggctggatgatctgtggatcatcaagctggtgctgcccgttggccttggcctc
ttggctgtcgcaatcgtgtgggaaaccggacgcttgatccggggaaaccgcgcaacatga
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