Pseudohalocynthiibacter aestuariivivens: G5B38_18025
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Entry
G5B38_18025 CDS
T06463
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paed03021
]
G5B38_18025 (rpoH)
Transcription machinery [BR:
paed03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G5B38_18025 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QIE47269
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All DBs
Position
3706541..3707437
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AA seq
298 aa
AA seq
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MGNYANLPAPTPEGGLNRYMQEIRKFPLLEPEEEYMLAKRWVEQEDTEAAHRMVTSHLRL
AAKIAMGYRGYGLPQAEVISEANVGLMQAVKRFDPEKGFRLATYAMWWIRASIQEYILRS
WSLVKLGTTSAQKKLFFNLRKAKSKIGALEDGDMHPDNVKKIATQLGVTETEVISMNRRM
SGGDASLNATVGSEGEGTMQWQDWLEDEDADQASDYEARDELHARRELLAEAMDVLNDRE
KDVLTQRRLSDKTVTLEDLSGQYDVSRERIRQIEVRAFEKLQKRMRGLAQEKGMLASA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgggcaattatgcaaatctgccggcaccgacgccggaaggcggtctgaaccgctatatg
caggaaatccgcaagtttccgcttctggagccggaagaggaatacatgctcgccaaacgc
tgggtagagcaggaagacaccgaagcggcgcaccgaatggtgacgtcacacctgcggctc
gccgccaagatcgcgatgggatatcgcggttacgggctgccgcaagccgaagtgatctca
gaggccaatgtgggtctgatgcaggccgtgaaacggtttgaccccgaaaaagggttccgg
ttggcgacctatgcgatgtggtggatcagggcgagcattcaggaatatatcctgcggtcg
tggagcttggtcaagttgggaacaacatcggcgcaaaagaagcttttctttaacctgcgc
aaggccaagtccaagatcggtgcgctggaagatggtgacatgcaccccgacaacgtcaag
aagatcgcgacacagttgggcgtaaccgagactgaagtgatctcgatgaaccggcgtatg
tcgggaggtgatgcgtcgctgaatgccaccgtcggttccgaaggcgaaggcacgatgcaa
tggcaggactggctggaggacgaagatgccgaccaagccagcgactatgaggcgcgggac
gagttgcatgcgcgtcgcgaactgttggcagaggcgatggatgtattgaacgaccgggaa
aaggacgtgctgacccagcgccggttgagtgacaagactgttacgctagaggatctgagc
ggccaatatgacgtgagccgagagcgcattcgccagatcgaggtgcgcgcgttcgagaag
ctacaaaagcggatgcgcgggcttgctcaggaaaaaggcatgcttgccagcgcgtga
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