Pseudohalocynthiibacter aestuariivivens: G5B38_18565
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Entry
G5B38_18565 CDS
T06463
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Pathway
paed00190
Oxidative phosphorylation
paed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
G5B38_18565
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G5B38_18565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paed03019
]
G5B38_18565
Enzymes [BR:
paed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
G5B38_18565
Messenger RNA biogenesis [BR:
paed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
G5B38_18565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QIE47364
LinkDB
All DBs
Position
complement(3805094..3807268)
Genome browser
AA seq
724 aa
AA seq
DB search
MTQADFLKSPFPEATDLPDLDTTGPGRFYNRELSWLGFNWRVLEEAQNSRVPLLERLRFL
SISATNLDEFYNVRVAGLRELARAGNTTPAADGLSPAEQLVLINDDARKLLASQQETFQS
LRGELEAENIVILDRASLTDDDQSYLSDVFLNKVFPVLSPLAIDPAHPFPFIPNLGYSLA
LQLERAQDKRPLRALLPIPQQIDRFVALPSEDGTYRFLPLEELLLLHLPSLFPGYKYKAH
CAFRVLRDSDLEVEEEAEDLVREFEVALKRRRRGEVVRMKISTDAPAALRELVMDELHVI
PEEVVEVEGMLGLADLKELVLDARPDLLWPIFTPRVPERVQDHDGDMFAAIRQKDMLLHH
PYETFDMVIRFLAQAARDPDVVAIKQTLYRTSNRSPIVEALCEAAENGKSVTALVELKAR
FDEAANIRQSRRLERAGAHVVYGFLDLKTHAKISTVVRREGDNLVTYTHYGTGNYHPITA
RIYTDLSFFTCDTTLGRDATKVFNYLSGYAQPDQLENLAISPITLKPRLLSMIAAEIDHA
KAGKPAEIWAKMNSLIDPDIIDALYAASQAGVKISLVVRGICGLRPGIRGLSENIRVKSI
VGRFLEHSRIVCFGNGHGLPHKKARVYISSADWMGRNLNRRVETLVEIENPTVKAQITSQ
VLAANMADVAQSWVMAPDGSFTRTSMPEGEFAFNCHRFFMENPSLSGRGSAGASDVPKLT
HTED
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagctgattttctgaaatcccccttccccgaagcgacagatttgcctgatctg
gacacgaccggacccggacgattctataatcgcgaactgagctggctgggcttcaactgg
cgcgtgctcgaagaggcgcagaacagccgcgtgccattgttggaacgtctgcggttcctg
tcgatctcggccaccaatctggatgaattctataacgtccgggtcgcgggcctgcgtgaa
ttggcgcgcgccggcaacacaacgcccgccgctgatggcctgtcccccgccgaacagctg
gtgctgatcaacgacgacgcgcgcaagctgctggcatcgcaacaggaaacattccagtcc
ctgcgcggcgagttggaagccgaaaatatcgtcattctcgaccgtgccagcctgaccgac
gatgatcaaagctatctgtcagatgtgtttctgaacaaggtgttcccggtactatcgccg
ctggccatcgacccggcgcatccgttcccctttattcccaaccttggctattctctggcg
ctacaattggaacgggcacaggacaaacgtccattgcgtgcgctgctgcccattccccag
caaatcgaccgtttcgtagccctgcccagtgaggacggcacctatcggtttctgccgctg
gaggaattgctgctgctgcaccttcccagcctctttcccggttacaaatataaggcgcat
tgcgcctttcgcgtgctgcgcgacagcgatctggaggtcgaagaagaagccgaggatctg
gtgcgcgaattcgaggtggcactcaaacgtcgccgtcgtggcgaagtcgtgcggatgaaa
atctcgaccgatgcccctgccgccctgcgcgagttggtcatggacgagttgcacgtcatc
cccgaagaagtggtcgaagtcgagggaatgctcggccttgccgatctcaaggaactggtg
ctggatgctcgccctgaccttctgtggcccattttcaccccccgcgtgcctgaacgcgtg
caggatcacgatggcgatatgttcgccgcgatccggcaaaaggacatgctgctgcatcac
ccctatgagacgttcgatatggtcatccgctttctcgcgcaggccgcgcgcgacccggat
gtggtggcgatcaagcagacactttaccggacgtccaaccgctcaccgattgtcgaggcc
ctgtgcgaggctgccgaaaacggtaaatccgtcaccgcactggtcgaactgaaggcgcgg
tttgacgaggccgcgaacattcgtcagtcgcgccgactggagcgcgcgggcgcgcatgtg
gtctatggatttctagacctcaagacacacgccaaaatcagcaccgtggtgcgtcgcgaa
ggcgacaatctggtgacctacacccattacgggacaggcaactatcacccgatcacggct
cgcatctataccgatctgtcattctttacctgtgacacgacgctgggccgtgatgcgacc
aaggtgttcaactatctgtcgggctacgcgcagccggatcagctggaaaacctcgcgatt
tcaccgatcacgctaaagccccggctgttgtcgatgatcgctgccgaaatcgatcacgcc
aaggcgggaaaaccggccgaaatctgggccaagatgaattcgctgatcgacccggacatt
attgacgcgctctatgccgccagtcaggcaggggtcaaaatcagcctcgtcgtgcgcggc
atctgcggattgcgtcccggcatcagggggctgagcgagaacatccgcgtgaaatctatc
gttggacggtttctggaacacagccgcatcgtgtgttttggcaatggtcacggcctgccg
cacaagaaggcgcgggtctacatttcttctgccgactggatggggcggaacctgaaccgt
cgtgttgaaacgctggtcgagatcgaaaacccgaccgtcaaggcgcagatcaccagtcag
gttttggcagcaaacatggccgacgttgcccaaagctgggttatggcaccagatggctca
ttcacccgtacgtccatgccagagggtgaatttgcgttcaattgtcacaggttcttcatg
gaaaacccttcgttgtcggggcgcggttctgccggggcgtcggacgtgccgaaactgacc
cacaccgaagattga
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