KEGG   Pseudohalocynthiibacter aestuariivivens: G5B38_21090
Entry
G5B38_21090       CDS       T06463                                 
Name
(GenBank) type IV secretion system DNA-binding domain-containing protein
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
paed  Pseudohalocynthiibacter aestuariivivens
Pathway
paed03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:paed00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    G5B38_21090
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:paed02044]
    G5B38_21090
Enzymes [BR:paed01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     G5B38_21090
Secretion system [BR:paed02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   G5B38_21090
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG NPHP3_N AAA_22 AAA_10 AAA_16 ATPase TrwB_AAD_bind FtsK_SpoIIIE CbiA nSTAND3 DUF87 SbcC_Walker_B DUF3987 Zot AAA_29 SIP1 ABC_tran
Other DBs
NCBI-ProteinID: QIE48104
LinkDB
Position
pRR4-35_4:58300..60663
AA seq 787 aa
MPREAALDLRTMTPEWYARETRLAHMLPYVSLVDHQTVRTRVNELFQCIRLDGVNSYTTD
DAYLDKVTALFARIIAQLGPEFSYYVHKVSKAITPDLEPLREDSFAGEVDRLWRKKLETS
GLRDKTLTLTIIHRPPPKSVLPFLNRSAPDRLKDATEKRLRRLGEAVNVFLSGLTELNPR
VLSAKSGELIGFLGALNTGQELPLYPANTYGFLSFNVANTRVTFQGDHFELSEGVVGHRY
GKSFTIGEYSEGTSCTMFDMLNLPVDMIVTHSFTPINSNLMAGRIKRQKRQMQASQDAAL
SLMEALDIAADDLEAKRQSFGEHHMVVTIFCDTLDELQSLSAEIVNAAAAEGVKMIGERV
AAKAHYLSQHPGNQPKRVRASAITNRNFADFAAFHRTQLGKPATKTPWGRVITYLPTPEQ
SAYRFSYHEQGSPDKEPTSGHTLIMGRPGSGKSVLSAFLMTQARRAGSRIFVFDYRLGME
MAVRANGGRYASLKAGQPTGLNPLWTETDARGTAWLSDWLATLLYRADKPLTPAQTNRIQ
EVVRQNAQATNPALRNWRDFASLFVSTDDGGDLHQRLLEWTEEGRYGWIFGQTLEDTFSL
KGNMVGFDLTGILDSEAEKERMAVLSYLFRRVEREIEDRRPTIIVIDEAWKALDNAYFAE
RLSNWLVTARKQNTVAVMMTQYASQLERTRTGKTIIEAVPTQILLPNIRAHAADYAMLNL
YEKELDVLLNTGSDSRLALIRDDQGSIVVDADLSALGPNLTILGGMEKGEALVGADYRNR
PDFWRIS
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgccccgtgaagccgcgcttgatctccgcacgatgacgccggagtggtatgcgcgcgag
acccgcctcgcgcacatgctgccctatgtgagcctcgtcgatcaccagaccgtgcggacc
cgggtcaacgagcttttccagtgcatccggctcgacggggtcaatagctatacgaccgat
gacgcctatctcgacaaggtgaccgcgctctttgcccggatcattgcgcaattggggccg
gagttcagctattacgtccataaggtctcgaaggcgatcacgccggacctcgagccgctg
cgcgaggacagtttcgcgggagaagtcgaccggctctggcgcaagaagctagagaccagc
gggctgcgcgacaagacgctcacccttacgatcatccatcgcccgcctccaaaaagcgtc
ctgccattcctgaaccgcagcgcgccggatcgcctcaaggacgcgaccgagaagcgcctt
cgccgattgggcgaggccgtgaacgtgttcctgtctggcctgacggagcttaacccacgt
gtgctttcggccaagtccggcgagttgattggcttcctaggggccctcaacactggccag
gaactgccgctctatccggcgaacacctatggcttcctgtccttcaacgtcgccaacacg
cgagtgacgtttcaaggcgatcacttcgaactctccgaaggcgtcgtgggacaccgctac
ggcaagagtttcaccatcggggaatactcggaaggcacctcctgcaccatgttcgacatg
ctgaacctgccggtcgacatgatcgtcacccattccttcacgccgatcaattcgaacctc
atggcgggccggatcaagcgccagaagcgccagatgcaggccagccaggacgcggccctc
tcgctcatggaagccctcgatatcgctgccgatgatctggaggccaagcggcagagcttc
ggcgagcaccacatggtcgtgacgattttctgcgatacgctggacgagttgcagagcttg
agcgccgagatcgtgaacgccgcggccgccgaaggcgtgaagatgatcggcgagcgggtc
gcggccaaggcgcattacctcagtcagcatcccggcaaccagcccaagcgcgtgcgcgcc
agtgccatcaccaatcgcaacttcgcggatttcgcggccttccaccggacccaactcggc
aaacccgccacgaaaaccccttggggccgcgtcatcacctatctgcccacgcccgagcag
agcgcctatcggttttcctatcacgagcaaggctcgcccgacaaagaacccaccagcggg
catacgctgatcatgggacgacccgggtcaggcaaatcggtcctctcggccttcctcatg
acgcaagcccgtcgagcagggtcgcggatcttcgtcttcgattaccgcctcggtatggag
atggcggtccgcgccaatggcgggcgctacgcgtcattgaaagctgggcagcccacaggg
ctcaatcccctttggaccgagaccgatgcgcgcggcacggcatggctctcggattggctt
gctacgcttctgtatcgcgccgacaaaccgctcacacccgcccagaccaaccgcatccag
gaagtcgtgcgccaaaacgcacaagccacgaacccagccttgcggaactggcgcgacttc
gcatcgctgttcgtttcgaccgacgatggcggcgatctgcaccagcggctgctcgagtgg
accgaagagggccgctacggctggattttcggacagacgctggaagacactttctcgctg
aagggcaatatggtgggcttcgatctgaccggcattctcgacagcgaggccgagaaggaa
cgcatggccgtcctctcctatctcttccgccgggttgagcgcgagatcgaggatcggcgc
cccaccatcatcgtgatcgacgaggcctggaaggcgctcgataacgcgtatttcgccgag
cggctgtcgaactggctggtgaccgcgcgcaagcagaacactgtcgcggtgatgatgacg
caatacgccagccagctcgagcgcacccggaccggcaagaccatcatcgaagccgtgccc
acgcagatcctgcttccgaacatccgcgcccatgccgccgattacgcgatgctgaacctc
tatgagaaggagctggacgtccttctcaataccggcagcgacagccgtctcgccctcatc
cgagacgaccagggctccatcgtcgtcgatgccgatctgagcgcgcttgggcccaatcta
accatccttggcggcatggaaaaaggcgaggcgcttgtcggcgccgattaccgcaaccgc
ccggacttctggaggatttcatga

DBGET integrated database retrieval system