Pseudohalocynthiibacter aestuariivivens: G5B38_21640
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Entry
G5B38_21640 CDS
T06463
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paed03400
]
G5B38_21640
DNA repair and recombination proteins [BR:
paed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G5B38_21640
Archaeal homologous recombinant proteins
G5B38_21640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
QIE48210
LinkDB
All DBs
Position
pRR4-35_5:48517..49653
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AA seq
378 aa
AA seq
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MRILHTADLHLGRQFMGLSLEEDHEVVLGQILETLLVERVDVLVIAGDVFDRASPPNSSI
RQFNRFLKRVTEETEAEVVMISGNHDSGDRIEAMSVFSTASRVLVRGIADAVETPLVLSD
EHGEIAFSALPFSYEYAAREVFGDEGISTPADVIAAQISAARGQVPEGARWVVVAHAFVA
GGAVGETERALTRVGGIETVPSDVFDGADYVALGHLHKPQEVGANHIRYSGAPLAFGFDE
AGSEKSMTVVDLKAEGVEIRTVAFRPIRQVRSLTGAFSDLLAGTPSEDFIQANLTDENPL
IDPMKRLRATYPNACHLAYDRQGRAPETKMLSSGRVAVTPIEMVGDFMKIVRGREPSAAE
VEIVADKLHASASGEEQT
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgagaatacttcatactgcagatctgcacctggggcgtcagttcatggggctgagcctc
gaggaggatcatgaagtcgtcctaggccagattctcgagacgctcttggtcgaacgggtc
gatgttcttgtgatcgctggggacgtttttgatcgtgcctcaccgcccaactcgtctatc
cggcagttcaaccgcttccttaagcgtgtgacagaagagacagaagccgaggtggtgatg
atctcgggaaaccacgattccggtgaccggatcgaggcaatgtctgttttctccaccgcg
tcgagggtgctggttcgcggaatcgccgacgcggtggagactccgcttgtgctgagtgac
gagcatggcgagatcgccttttccgcgctgcccttttcctatgaatatgccgcgcgggaa
gtgtttggggacgagggtatcagcacgccagcagatgtcatcgcagcccaaatctccgca
gcgaggggtcaggtgcctgaaggagcacgttgggtcgtagtggctcatgccttcgttgca
ggcggcgcggtcggtgagaccgagcgcgccctgacacgggtcggcgggatcgaaactgtg
ccctctgatgtcttcgacggggcggattatgtggcactggggcatttgcacaagccgcag
gaagtaggcgcgaaccatattcggtattccggcgcaccgctcgccttcggtttcgacgag
gcgggaagtgaaaaatccatgactgtcgtcgatctcaaagctgaaggagtcgagatccgt
accgtagccttccgtccgatccggcaagtgcgttcgctgaccggggcattctcggatctt
ctggcaggaacgccgtctgaagacttcatccaagccaatctaacggatgaaaaccctctg
atagatccgatgaagcggttgcgcgcgacctaccccaatgcctgccatctggcctacgac
cgacagggtcgcgccccagagaccaaaatgcttagcagtgggcgggtcgcggtcacgccg
atcgagatggtcggcgatttcatgaagattgtacgcggccgggaaccaagtgctgccgaa
gtcgagatcgtcgcggacaagctccacgcctcagcctccggggaggaacagacatga
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