Paenibacillus sp. FSL R7-0331: R70331_06300
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Entry
R70331_06300 CDS
T03357
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
paee
Paenibacillus sp. FSL R7-0331
Pathway
paee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R70331_06300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paee03019
]
R70331_06300
03400 DNA repair and recombination proteins [BR:
paee03400
]
R70331_06300
Enzymes [BR:
paee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R70331_06300
Messenger RNA biogenesis [BR:
paee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R70331_06300
DNA repair and recombination proteins [BR:
paee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
R70331_06300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
RecQ_Zn_bind
HRDC
Helicase_Sgs1
ResIII
Motif
Other DBs
NCBI-ProteinID:
AIQ51162
LinkDB
All DBs
Position
1408246..1410081
Genome browser
AA seq
611 aa
AA seq
DB search
MNMQAPTMEQAQAELQKYYGYPDFREGQKRIVQHLLEGGDTLGIMPTGGGKSICYQVPAL
LMPGLTLVISPLISLMKDQVDALTTAGISAAYINSTLSGKEVNERIRAARRGELKLLYVA
PERLELDWFRLEMAGLSISCVAVDEAHCVSQWGHDFRTSYLAVAPFVEELPQRPILAAFT
ATATPEVMEDMVRLLRLRQPGVFMTGLGRDNLAMSVLRGENKREFVLDYAASHSHQPGIV
YAATRKEVDDLHQRLQASGIAAGRYHAGMSDQERADSQEGFLYDDIRVMVATNAFGMGID
KSNVRYVIHYNMPKNMEAYVQEAGRAGRDGEPSECILLFSAQDIMTQKFLIEQNPQDAER
KANEYRKLQQMIDYCYTTRCLRSAQLAYFGEDDEDNLCGICSNCTDERELVDMTVDAQKI
FSCIHRMRERFGVALVASVLKGSRNQKVLQYGFEQLPTHGAMSSRTEKEITESINVMISE
GYLALSEGQYPVVRLQPAAAEVLRGQRQVQQRVARPLVTGGAGSGRSRSRGYDHSPSAVN
ETVFEQLRLIRRDLAGREHVPSYIIFNDATLREMSVVCPQTEAEMLRVKGVGEVKYRKYG
KPFLEFFQNDM
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgcaagcacctacaatggaacaggcgcaggctgaactgcagaaatattacggc
tatcccgatttccgggaaggccagaaaagaatcgtacagcatctgctcgaaggcggcgat
acgctgggtatcatgccgaccggcggaggcaaatcgatctgttatcaggttccggcgctc
ttgatgccggggcttacccttgttatctcgccgctgatctcactgatgaaggatcaggtg
gatgccttgactacggccggcatttcggccgcttatattaacagcaccctgagcggaaag
gaagtgaatgagcggatccgcgccgcacgccggggtgagctgaagctgctctacgtggcg
ccggagcggctggagctggactggttccgcctggagatggcgggcctttcgatctcctgt
gtggctgtggacgaagcgcactgcgtgtcgcagtgggggcatgacttccgcacaagctat
ctggcggtagcaccgtttgtcgaggagcttccgcagcggccgattctcgccgcttttacg
gcgacggctacaccggaggttatggaggacatggtccggctgctgcgtctgcgccagccg
ggtgtgttcatgaccgggctcgggcgggacaatctggcgatgtcggtactgcgcggtgag
aacaaacgcgaatttgtgctcgactatgccgcgagccattcacaccagccgggtattgtg
tatgctgcgacccgtaaagaggtggatgatcttcaccagcgtctgcaggcttcgggaatt
gctgcaggccgctatcatgccggaatgagcgaccaggagcgggcggacagccaggaaggc
ttcctctatgatgacatccgggttatggttgcgaccaatgcgttcgggatggggatcgac
aaatccaacgtgcgctatgttattcactacaacatgccgaagaatatggaggcttatgtc
caggaggccgggcgcgccggccgggacggggagccgagtgagtgtatcctgctgttcagc
gcgcaggatattatgacccagaaattcctgatcgagcagaacccgcaggacgctgagcgc
aaggccaatgaataccgcaagctgcagcagatgattgattactgctatacgacccgctgc
ctgcgcagcgcgcagcttgcctatttcggcgaagatgatgaggacaacctgtgcggaatc
tgcagcaactgcacggatgaacgcgaactggtcgatatgaccgtggacgcgcagaagatt
ttctcctgcatccaccggatgcgggagcgcttcggggtggcgctggtggcgtcggtgctg
aagggctcccgcaaccagaaggtgctgcagtacggcttcgagcagctgccgacgcatggt
gcaatgtcgagccgcacagagaaggaaattaccgagagcatcaatgtaatgatctcagag
gggtatctggccctttcggagggccagtatccggtagtgcggctgcagccggcggcagcc
gaggtgctgcgcggccagcgccaggtgcagcagcgggtggcgcggccgctggttaccggc
ggagcgggctccgggcggagccgcagccggggctacgatcattcaccgtccgcagtcaac
gagacggtgttcgagcagctgcgcctgatccgccgcgatctggcgggtcgcgagcatgtg
ccgtcctatattattttcaatgatgcgaccctgcgtgagatgagtgtggtttgtccgcag
acggaagcggagatgctgagagtgaagggcgtcggagaagtgaagtaccggaaatacggc
aagccgttcctggagttttttcaaaatgatatgtaa
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