Paenibacillus sp. FSL R7-0331: R70331_10195
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Entry
R70331_10195 CDS
T03357
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
paee
Paenibacillus sp. FSL R7-0331
Pathway
paee03030
DNA replication
paee03430
Mismatch repair
paee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R70331_10195
03430 Mismatch repair
R70331_10195
03440 Homologous recombination
R70331_10195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paee03032
]
R70331_10195
03400 DNA repair and recombination proteins [BR:
paee03400
]
R70331_10195
Enzymes [BR:
paee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R70331_10195
DNA replication proteins [BR:
paee03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R70331_10195
DNA repair and recombination proteins [BR:
paee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R70331_10195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
DUF655
HROB
Motif
Other DBs
NCBI-ProteinID:
AIQ51847
LinkDB
All DBs
Position
2413814..2417479
Genome browser
AA seq
1221 aa
AA seq
DB search
MSPFVHLHVHSEYSLLDGAARITDLVRRAGEYGMKSLALTDHGVMYGAIPFYKACTAAGI
KPIIGCEAYLTAGSRRERGSRKDQPIYHLILLAKNETGYRNLMKLVSIGHLEGQHYKPRI
DMEALADHAEGIICLSACLGGEVPQHLLHGRGDEARKAALRYKEIFGGDFYLELQDHGIP
EQKRVNPQLIELASELDIQLVATNDVHYLAKEDAEVQDVLICIGTGKTVDDEDRLKIGTD
QLFLKSGEQMAALFPHVPQAILNTQEIADKCNLELTFGQHILPEYSPLPEGVDAAAYLRG
LCRSGLEDRYAGTQQWASPEGKAAAEQRLDYELGVIESMGFSDYFLIVWDFIAYCHKNGI
VTGPGRGSSAGSLTAYTLRITDVDPLKYNLLFERFLNPERITMPDIDIDFSDERRDEVIA
YVVEKYGKEHVAQIITFGTMAARAAVRDVGRVLNLPYNEVDKAAKLIPGQLGISIARALE
GSPDLKALYETSRKTRELLDMAMKVEGMPRHASTHAAGVVISKGPLTDAVPLQAGNESTA
LTQYSMEHLESVGLLKMDFLGLRTLSIIERCMNWIKEMDGAAPDFRTIADNDPLTYEMLG
AGETTGVFQLESAGIRRVLKDLKPSGFEDVISVLALYRPGPMEFIPKFIAGKHGDITVDY
PHADLTPILADTYGIIVYQEQIMQIASLMAGFSLGEADLLRRAVSKKKRETLDKERSHFV
QGSLQLGYQEQDANAVYDMIVRFADYGFPRAHAAAYGVLAFQTAYLKAHYPVQFMAAMLT
AVMGTHRKVAEYVLECRRSGIGVLPPDVNESGVLFTPVPGAHGNGGHIRFGLAAVKNVGT
LAVENIMAVRKERPFDSLLDFCRRVDLRVCNKRVIESLLQAGAFDRLPGHRAQLLAMLDE
TADAAAKWRKERDELQIQLFDDLIETPNWEIRYPDIPKFSVTQQLELERELLGLYLSGHP
LDDSAALLEEPGIQRLMDLGEAADESQTVTAGMVVSIKEITTKAGKAMAFIQWEDQIERC
EVVLFPEVWKRSRSLVEKGALLALRAKVQQEDEGFKLLAEEVAPLGADALHGLLQRRSAA
ASRPSGGRTASAGAQRSAPGPRGGAGGTGAPRTAAGGAAAPAAPPAAPAGAPRQEAPRPA
AAAAGNAQRVFIKITPDAENPALLSRLQALLQTHPGAAATLLFYEREQRVLALSDSYRIE
PSPELFAAVEEMLGAGTVRIK
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgagcccattcgtgcatttgcatgtgcacagcgaatacagtttactggacggtgcggcg
cgtattacagatctcgtgcgccgggccggcgaatacggcatgaagtcgctggcgctgacg
gatcatggagtgatgtatggggccatccccttttataaagcatgcacagccgcaggcatc
aagccgattatcggctgtgaagcctatctgacggcaggctcgcgccgtgagcggggcagc
cgcaaggatcagccgatctatcacctgatcctgctcgcgaagaatgaaaccggctacaga
aacctgatgaagcttgtctccatcggccatctggagggtcagcattacaagccgcgaata
gatatggaagcactggctgatcacgccgagggtatcatctgcctgagcgcctgcctgggc
ggagaggtgccgcagcatctgctgcacgggcgcggggatgaggcgcgcaaggcggcgctg
cggtataaggagatttttggcggagacttctatctggagctccaggaccatggcattccg
gagcagaagcgggtcaatccgcagctgatcgaactggcttcagagcttgatatccaactg
gttgccaccaatgatgtccactatctggccaaagaggacgccgaggttcaggatgtgctg
atctgcatcggcaccggcaaaacggtggatgatgaggacaggctgaagatcgggacggac
cagctgttcctgaagagcggggagcagatggcggcgctgtttccgcatgtaccgcaggca
atactcaatacgcaggaaatagcggataaatgtaatctggagctgacgttcggacagcat
attctgcccgaatattccccgctgccggaaggtgtggacgccgctgcttatctgcgcggg
ctatgccgaagcgggctggaagaccggtatgccggtacacagcaatgggcttcacctgag
gggaaggcggcggcggagcagcgtctggactacgagctgggcgttattgagagcatgggc
ttcagcgattattttctgatcgtctgggatttcattgcctattgtcacaagaacggaatt
gttaccgggccgggccgcggctcttcggcgggaagcctcactgcgtataccctgcggatc
accgacgtagacccgctgaaatacaacctgctctttgagcgcttccttaatcccgagcgg
ataacgatgcccgatattgacatcgacttcagcgatgagcgccgcgatgaggttatcgcc
tatgtcgtggagaaatacggcaaggagcatgtggcccagattatcaccttcggaacgatg
gctgcgcgggcggcggtccgcgatgtcggccgggtgctgaacctgccttacaatgaggtg
gacaaggccgcgaagctgattcctgggcagctcggaatcagtattgcccgggcgctggag
ggcagccctgacctgaaggcgctgtatgagaccagccgcaagacgcgggagctgctggat
atggcgatgaaggtcgaaggcatgccgcgccatgcctccacacatgctgccggtgttgtg
atttccaaaggcccgctgaccgatgcggtgccgctgcaggccggcaatgagagcacggcg
ctgacccagtattccatggagcatctggagagcgtcgggctgctcaagatggattttctg
gggctgcggacgctgtcgattattgagcgctgcatgaactggatcaaggaaatggacggg
gcggctcccgatttccggaccattgccgataatgatccgctgacctatgaaatgctcggg
gcgggcgagacgaccggtgtgttccagctggagtctgcgggtatccgccgcgtattgaag
gacctgaagccgtcgggctttgaggatgtgatctcagtgctagcgctgtaccgtccgggc
ccgatggagtttatccccaagttcatcgccggcaagcacggcgacatcacggtcgattat
ccgcatgccgacctgacgccgattctggcggatacgtacggcatcattgtctatcaggag
cagattatgcagattgcctccctgatggcaggcttctcgctcggggaagcggatctgctg
cgccgtgcggtatccaagaagaagcgtgagacgctggacaaggagcgcagccatttcgtg
cagggcagcctgcaactgggctatcaggagcaggatgcaaatgccgtgtatgatatgatt
gtccggttcgccgattacggcttcccgcgtgcccatgctgccgcttacggtgtgctggcc
ttccagacggcctatctgaaggcgcactatcccgtgcagttcatggcggccatgcttacg
gctgtcatgggtactcaccgcaaagtagcagaatatgtgctggaatgccggcgctccggc
atcggagttctgccgcctgatgtcaacgaaagcggtgtgctgtttactccggttcccggc
gcacacggaaacggcgggcatatccgcttcggtctggcggccgtgaaaaatgtcggaaca
ctggctgtagagaatattatggctgtccgtaaggagcgtccgttcgacagcctgctcgat
ttctgccgccgtgtcgatttgcgcgtctgcaacaagcgggtcattgaatccctgctccag
gccggcgcctttgaccgtctgcccgggcaccgggcccagctgctggctatgctcgatgag
accgccgatgccgcggccaagtggcgtaaggagcgcgacgagctgcagatccagctgttc
gatgatctcatcgaaaccccgaactgggaaatccgctacccggatattccgaaattcagt
gtcacccagcagctggagctggagcgtgagctgctcggcctctacctgtccggccatccg
ctggacgacagcgcagccctgcttgaggagccgggcatccagcggctgatggaccttggc
gaagccgcggatgagagccagacggttacggccggaatggtcgtatccattaaggaaatt
acgaccaaggccggcaaggcgatggccttcatccagtgggaggaccagatcgagcgctgc
gaggtcgtgctgttcccagaggtgtggaaacgcagccgcagcctggtcgagaagggtgcg
ctgctggccctgcgcgccaaggtgcagcaggaggacgagggcttcaagctgctggccgag
gaggtcgcgccgcttggcgcagacgctctccacggcctgctgcagcgccgcagcgcagct
gcctcccgtccgtccggcggacggacggcctctgcaggagcgcagcgcagcgctcctggc
ccgcggggcggcgccgggggcaccggcgcgccgcgcactgccgcaggcggcgcagcagcg
cctgcagccccgcctgccgcacctgcgggtgcgccgcggcaagaggcgccgcgtccggcg
gctgccgcggcggggaacgcccagcgtgtctttatcaagatcacgccggatgcagagaac
ccggcgctgctctcgcgcctgcaggcattgctgcagacccatcccggggctgcagctacg
ctcctgttctacgagcgcgagcagcgggtgctggcgctaagcgacagctaccggatcgag
ccttcgccggagctgttcgcagcggttgaagagatgctgggagccggtacagtaagaata
aaataa
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