Paenibacillus sp. FSL R7-0331: R70331_11235
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Entry
R70331_11235 CDS
T03357
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
paee
Paenibacillus sp. FSL R7-0331
Pathway
paee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R70331_11235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paee03019
]
R70331_11235
03009 Ribosome biogenesis [BR:
paee03009
]
R70331_11235
Enzymes [BR:
paee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
R70331_11235
Messenger RNA biogenesis [BR:
paee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R70331_11235
Ribosome biogenesis [BR:
paee03009
]
Prokaryotic type
rRNA helicases
R70331_11235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
CMS1
AAA_30
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AIQ52031
UniProt:
A0A089KS89
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All DBs
Position
2662294..2663961
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AA seq
555 aa
AA seq
DB search
MKTFAEFGLEPKVLQAITELGFEESTPIQEQAIPIALTGADMIGQAQTGTGKTAAFGIPL
ISKISREDERITALVMTPTRELAIQVAEEIGKLSRFKGLRSLAIYGGQDIGRQIRGLKKK
PQIIIGTPGRLLDHINRKTIRLDDVQTVVLDEADEMLDMGFMEDIQSILKLVPEERQTML
FSATMPPNIQRLAQQFLKNPQHVSVIPKQISAPLIDQAYIEVPERQKFEALSRLIDMESP
ELAIVFGRTKRRVDELAEGLQKRGYSADGLHGDLSQNQRDAVMRKFRDGSIDVLVATDVA
ARGLDVSGVTHVINFDLPQDPESYVHRIGRTGRAGKEGTAWSFVTPREMDHLHLIERVTR
HRITRKPLPTMAEAIEGKQRITAERLLAMVEAGELNEYKGIAIQLLEQYDSVQLLSAAMK
LLTGDSKDAQVELTPEDPIRAKRRGGKNDIRSGRKPNGGYGGNRSGGSGGGYRGNREGGN
REGGSYGGGYKGNRDNAGGTTRGGYSSGYGGNSSSGGYKGNRDDAGRSSDRKPYTPRPSS
STSTRPAKREDYDNN
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacattcgcagaattcggcttggagcctaaggtgcttcaagcaatcacagagcta
ggatttgaggaatcaacaccgattcaggagcaggcgattccgatcgcgctgactggagcg
gacatgatcggccaggctcagacaggtaccggtaagaccgctgccttcggtattcctctt
atctccaaaatctcccgggaagatgaaagaattacagctcttgttatgacgcctacccgt
gagctggcaattcaggttgctgaagaaatcggcaagctgtcccgcttcaaaggtcttcgt
tccctggccatctacggcggacaggatatcggacgccagatccgcggcttgaagaagaag
cctcagattatcatcggtaccccaggccgtctcctggatcatatcaaccgtaagaccatc
cgtctggatgacgttcagaccgtagtgctggatgaagctgatgaaatgctggatatgggc
tttatggaagatatccagtctatcctcaagctggttccggaagagcgccaaaccatgctg
ttctcagcgactatgcctcctaacattcaacgtcttgcccagcagttcctgaagaaccct
cagcatgtatcggttattcctaagcagatcagtgcgccgctgattgaccaggcatacatt
gaagttcctgagcgccagaagtttgaggctttgagccgtctgattgatatggagtcccct
gagctggcaattgtcttcggccgtaccaagcgccgtgtcgatgagcttgctgaaggactg
cagaaacgcggctactccgctgacggactgcacggtgacctgtcacagaaccagcgtgat
gctgttatgcgtaaattccgcgacggcagcattgatgtcctcgtagctacagacgtagca
gcccgcggcctcgatgtatcaggtgtaacccatgtaatcaactttgaccttccgcaagat
ccggagagctatgtgcaccgtatcggccgtaccggacgcgcaggtaaagagggtactgca
tggtcgttcgtgactccgcgcgaaatggatcacctgcacctgatcgagcgtgttacgcgt
caccgcattacccgtaagccgcttcctactatggctgaggctatcgaaggtaaacaacgc
attacagctgaacgcctgctggcaatggttgaagccggtgaactgaacgaatacaaagga
attgcaatccagctgctggaacaatacgattccgtacagctgttgtctgcagcaatgaag
ctgctgactggcgattccaaggatgcgcaggttgaactgacccctgaagatccgatccgc
gctaaacgccgcggcggcaagaatgatatccgcagcggacgtaagccaaacggcggctat
ggcggcaaccgttccggcggaagcggtggcggctatcgcggaaaccgtgaaggcggcaac
cgtgaaggcggaagctacggcggcggctacaaaggtaaccgcgataacgcaggcggcaca
actcgcggcggttacagcagcggctatggcggcaacagcagcagcggcggctacaaaggt
aaccgtgacgatgcaggccgcagctccgaccgtaagccttacactccacgcccaagcagc
agcacaagcacacgtcctgcaaagcgtgaagattacgataataactaa
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