Paenibacillus sp. FSL R7-0331: R70331_17155
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Entry
R70331_17155 CDS
T03357
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
paee
Paenibacillus sp. FSL R7-0331
Pathway
paee03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R70331_17155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paee03400
]
R70331_17155
Enzymes [BR:
paee01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
R70331_17155
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
R70331_17155
DNA repair and recombination proteins [BR:
paee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
R70331_17155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AIQ53082
UniProt:
A0A089KX54
LinkDB
All DBs
Position
complement(3928333..3929148)
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AA seq
271 aa
AA seq
DB search
MPELPEMENYRRLLSQHLINVPITGVTVNREKTINMETEAFQKALLGARIVFIERRAKHI
LFHLHDGRRLLLHLMLGGLLYYGTEAERPDRTTQVELAFGDNILYFMGLRLGYLHLLSVK
EGEAAMGKLGPELLDRRMTAERFAALLKGRRGALKSLLVNQKVMAGIGNCYADEIAFEAR
LLPSTLVQNLSAEAVTRLYDSVRKVLTEATDIGGYMEMPFMTGDTVTGSYNDQCKVYDRE
GEPCLRGGGTIVKVEQSGRKVFYCPDCQHEG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccggaaatggagaactatagaaggctgcttagccagcatcttataaat
gtgccgattacgggtgtgactgtaaaccgggagaagacaatcaatatggagaccgaagct
tttcaaaaagcgctgctgggtgcgcgtattgtctttattgaacgccgggccaagcatatc
ctgttccatctgcatgacggacgcaggctgctgcttcacctgatgctgggcggactgctg
tattatggcaccgaggcggagcgtccggaccgaactacccaggtagaactggctttcggg
gacaatatcctgtatttcatgggcctgcgccttggctatctgcacctgctgtcggtgaag
gagggcgaagcggctatgggtaagctgggacctgaattgttggaccggcggatgacggcg
gagcggttcgctgcgctgctgaagggacgccggggagcacttaagagcctgctggtgaat
cagaaggtgatggccggcatcggtaactgctacgcggatgaaattgcctttgaagccaga
ctgctgccgtccacgctggtgcagaacctgtcagcggaagctgttacacgcctgtatgac
agtgtgcgcaaagtgctgacagaagcgacggatatcggcggatacatggaaatgccgttt
atgaccggcgatacggtgaccggctcgtataatgaccagtgcaaagtatatgaccgtgag
ggcgaaccctgcctgcgcggcgggggaaccattgttaaggtagagcaatccgggcgcaaa
gtgttttactgtccggactgccagcatgaagggtag
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