Paenibacillus sp. FSL R7-0331: R70331_18255
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Entry
R70331_18255 CDS
T03357
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
paee
Paenibacillus sp. FSL R7-0331
Pathway
paee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R70331_18255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paee03019
]
R70331_18255
03016 Transfer RNA biogenesis [BR:
paee03016
]
R70331_18255
Enzymes [BR:
paee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
R70331_18255
Messenger RNA biogenesis [BR:
paee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
R70331_18255
Transfer RNA biogenesis [BR:
paee03016
]
Prokaryotic type
tRNA degradation factors
R70331_18255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
OB_RRP5_4th
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AIQ53281
UniProt:
A0A089KVR5
LinkDB
All DBs
Position
complement(4155391..4157493)
Genome browser
AA seq
700 aa
AA seq
DB search
MEQRVEMQLGGRRLVLETGRLAKQANAAVMVRYGDTAVLCTVTASSEPKDLDFFPLTVNY
EERLYAVGKIPGGFIKREGRPSEKAILSSRLTDRPIRPLFPEGFRNDVQVLNMVMSVDQN
CAPDIAAMIGTSAALSISDVPFDGPIGGVAVGRINGQFIINPDLAQQEASDIYVVVAGTK
DAIMMVEAEANEVPEDVMLEAIMFGHEEIRKIVAVIEELVAVAGKEKMAVKLHAVNADVN
TEVRAFAGDRLVEAVKIAEKHARQDAIDLVNSETVEYFVEKYIETPELLKDVKEVLHDIV
KDEVRRLITHDKVRPDGRKLDEIRPIECDTALLPRTHGSGLFTRGQTQILSVCTLGALGD
VQILDGIDPTETKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALSKVIPSETEF
PYTIRLVSEAIESNGSTSQASICASILAMMDAGVPIKAPVAGVAMGLIKDGEHVSILTDI
QGMEDHLGDMDFKVAGTAEGVTAIQMDIKIAGIDRKILKEALEQAREGRLFILGKMMEAI
SAPRPSLSQYAPKIIIININPDKIRDVIGAGGKIINKIIEETGVKIDIEQDGRVFIGSSD
EAMIQKARGIIEGIVKEVQVGEIYVGTVRRIEKFGAFVELIPGKDGLVHISQLSTERVAK
VEDVVAIGDTITVKVTEIDQQGRVNLSRKAVLTAESGAKA
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacgtgtagaaatgcagcttggcggaagacgccttgtgctggaaaccgggcgt
ctggccaaacaggcaaatgccgctgttatggtccgctacggagataccgcagtattatgt
acggttacagcctccagtgagcctaaagatctggattttttcccgcttaccgtgaactat
gaagaaagactatacgcagtaggtaaaattccgggcggattcatcaaacgtgaaggcaga
cctagcgaaaaagcgattctgtccagccgtctgactgaccgaccgatccgccctctgttc
cctgaaggattccgtaatgatgttcaagtattgaacatggttatgagtgtggatcagaac
tgcgcacctgacattgctgcgatgatcggtacttctgcagccctgagtatttccgatgtg
ccgtttgacggaccgatcggcggagtagcggttggccggattaatggccaattcatcatt
aaccctgatctcgcccagcaggaagccagtgacatctatgttgtggttgccggaaccaag
gatgccattatgatggttgaagcggaagcaaacgaagtgccggaagacgtgatgcttgaa
gccattatgttcgggcatgaagaaatccgcaagattgtagctgtgattgaggagcttgtt
gctgtagccggtaaagaaaagatggctgtgaagcttcatgcggttaacgcagacgtgaat
actgaggttcgtgcttttgccggagaccgtctggttgaggctgttaagattgctgagaag
catgcgcgccaggatgctatcgatctggtcaatagcgagacagtggagtatttcgttgag
aaatacatagagacaccagagctgttgaaggatgtaaaagaagtgctgcatgatatcgtc
aaggatgaagtgcgccgcctgatcacgcatgataaagtacgtcctgatggccgtaagctg
gatgaaatccgtccgattgaatgtgatacggcactgctgccgcgcacacacggttccggg
ctctttacccgcggacagacacaaatcctcagcgtatgtacacttggtgcgcttggtgat
gtgcagattcttgacggaatcgatccaactgaaaccaaacgcttcatgcatcattacaac
ttcccgccgttcagcgtaggggaagcacgtccgctgagagcaccgggccgccgcgaaatc
ggtcacggggcactgggtgaacgcgccttgtcgaaggttatccctagtgaaacagaattc
ccgtacaccattcgtctggtatcggaagctattgaatctaacggttcgacttcccaggca
agcatctgtgccagtattctggcaatgatggatgcgggtgtaccgatcaaggcccctgtg
gccggcgtagctatgggtctgattaaagacggagagcatgtctccatcctgacagacatc
cagggtatggaggatcacctcggagatatggactttaaggtagcaggaactgcagaaggc
gtaactgcaatccagatggatatcaagattgccggcattgaccgcaagatcctgaaggaa
gccttggagcaagccagagaaggacggctgttcatcctcggcaaaatgatggaagctatc
tctgcaccaagacctagcctgtcccaatatgcgcctaagatcatcatcattaacatcaat
ccggacaaaatccgtgatgttatcggtgccggcggcaagattatcaacaagatcatcgaa
gaaaccggcgtgaagatcgacatcgagcaggacggacgcgtattcatcggttcttccgac
gaagcgatgattcagaaggcccgcggtatcatcgaaggcatcgtgaaggaagtccaggtc
ggtgagatttatgtcggtaccgttcgccgcattgagaagttcggcgcattcgttgagctg
attccaggcaaagacggtctggttcacatctcccagctgtcgactgagcgcgtagccaag
gttgaagatgttgttgccatcggggataccattaccgtaaaagtaactgaaatcgaccag
cagggccgtgtcaatctgtcccgcaaggctgtattgactgcagagagcggagcgaaggca
taa
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