Paenibacillus sp. FSL R7-0331: R70331_18385
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Entry
R70331_18385 CDS
T03357
Name
(GenBank) RNA polymerase sigma factor SigD
KO
K02405
RNA polymerase sigma factor FliA
Organism
paee
Paenibacillus sp. FSL R7-0331
Pathway
paee02020
Two-component system
paee02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
paee00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
R70331_18385
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
R70331_18385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paee03021
]
R70331_18385
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
paee02035
]
R70331_18385
Transcription machinery [BR:
paee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
R70331_18385
Bacterial motility proteins [BR:
paee02035
]
Flagellar system
Flagellar assembly proteins
Stator
R70331_18385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_38
Sigma70_ECF
HTH_16
HTH_23
CtpB_N-like
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
AIQ53306
LinkDB
All DBs
Position
complement(4182913..4183701)
Genome browser
AA seq
262 aa
AA seq
DB search
MNEQKASQAVTDGLWEQWKEHGDPEAKKRLIENYLHIVDYVSSRLAVGLPKNVSKDDLAS
NGVMGLIDAIEKFDYKRGLQFQTYASWRVRGAILDSLRQSDWVPRSVREKAKKIEDAYQQ
LEQKYLRSVSDEEMSQHLNISEIEFQNMLQDVAVMSLCSLEDPIREEESETRMSILVDDK
AKNPDRKVNEFYLRDTLTKGIEKLTVKERTVVSLLYYEDLSLSEIAEVMSLSPSRISQLH
SKAILRLRGTLEKNRDLLMQND
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgagcaaaaagcttctcaagcagtaacagacggtttatgggagcagtggaaagag
cacggtgaccctgaggccaaaaaaagactgattgagaactacctccatattgttgattat
gtgtcaagccgactggctgtcggactgcccaaaaatgtctccaaggatgatttagccagc
aatggcgtaatggggcttatagatgccattgaaaagttcgactacaaacgcggcttgcag
tttcagacttatgcatcctggcgtgtgcgcggggctattctggactcattgcgccagagc
gactgggttcccagatccgtccgggaaaaagccaaaaaaatcgaggatgcctatcagcag
ctggagcagaaatacttaagatcagtcagtgatgaggaaatgagccagcatctgaacatt
tcagagatcgagtttcaaaacatgctgcaggacgtggccgttatgtcgctctgctctctg
gaagacccgatccgcgaagaagaatcggaaacacggatgtccatactggtggacgataaa
gccaaaaatccggaccgtaaagtaaatgagttttatttgcgcgacacactcaccaaaggt
atcgaaaaattaacggtgaaagaacggaccgtagtgtcccttttatattatgaggatcta
tctttaagcgaaatcgccgaggtcatgtctttatcaccttcgcggatttcacagcttcat
tcaaaagctattttgcgtctgcgcggaacgcttgagaaaaaccgtgacctgcttatgcaa
aatgattaa
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