KEGG   Paenibacillus sp. FSL R7-0331: R70331_27560
Entry
R70331_27560      CDS       T03357                                 
Name
(GenBank) RNA polymerase sigma70
  KO
K03090  RNA polymerase sigma-B factor
Organism
paee  Paenibacillus sp. FSL R7-0331
Brite
KEGG Orthology (KO) [BR:paee00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:paee03021]
    R70331_27560
Transcription machinery [BR:paee03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     R70331_27560
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r3 Sigma70_r2 Sigma70_r4_2 HTH_23 Sigma70_ECF GerE HTH_50 HTH_38 HTH_28 Cyclophil_like2 HTH_Tnp_ISL3 KORA DUF1492 TnsD HTH_24 MarR HTH_29 HTH_31 MarR_2 HTH_10 Phage_antitermQ HTH_3 DUF7343
Other DBs
NCBI-ProteinID: AIQ54875
UniProt: A0A089L470
LinkDB
Position
complement(6093750..6094520)
AA seq 256 aa
MSDKVTPPESMNEAVSLIWEYQQTKDNEIATVLIRKYEPMVKMAAGKIARNRPDLYEDLY
QVGQMALIRLLQQYDISLGIPFEPYAMKSMIGHMKNFLRDKSWYIQVPRRIKEKGALVQQ
AIDELTIRLERSPAVEEIAHYLDLTVEETVEVLAGRECYHYVSLDSPLSQEETGATLGEL
ISSDANDYETVEKRMDLQQALGQLKEQEQQVLLLAFQDGQSQRAIAQKLGVSQMSVSRIQ
KRATEKLKQIMANSSY
NT seq 771 nt   +upstreamnt  +downstreamnt
atgagtgacaaagtgactcccccagagtccatgaacgaagcggtaagtctgatctgggaa
taccagcagaccaaagataatgaaattgctactgtattgatccgcaaatacgagcctatg
gtcaagatggcggcaggcaaaattgcccgcaaccgtcccgacctctatgaagatttgtac
caggtaggacagatggcgctgatcagactgcttcagcaatatgacatcagtctgggaatt
ccctttgagccgtatgcgatgaagagtatgatcggccatatgaagaatttcctgcgggat
aaatcctggtacatacaggttccgagacgaatcaaggagaagggggcgcttgtccagcag
gccattgatgagctaaccatcaggctggagcgttcaccggctgtagaggaaattgcccat
tatctcgatcttaccgtggaagaaactgtcgaagtgctggccggcagggaatgctaccac
tatgtatcgcttgattcaccgctctcccaggaggagacgggagctacactcggcgagctg
atcagttctgatgccaatgactatgaaaccgttgaaaagcggatggatctccagcaggcg
ctgggccagctcaaggaacaggagcagcaggtgctgctgcttgcattccaggacggccaa
tcccagcgggccattgcccagaagctgggcgtgtcgcaaatgagtgtgtcacggattcag
aagcgggccactgagaagctgaaacagatcatggctaactcttcctattga

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