Paenibacillus sp. FSL R7-0331: R70331_28335
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Entry
R70331_28335 CDS
T03357
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
paee
Paenibacillus sp. FSL R7-0331
Pathway
paee03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
paee00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
R70331_28335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paee03021
]
R70331_28335
03400 DNA repair and recombination proteins [BR:
paee03400
]
R70331_28335
Enzymes [BR:
paee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
R70331_28335
Transcription machinery [BR:
paee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
R70331_28335
DNA repair and recombination proteins [BR:
paee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
R70331_28335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
PASTA
HHH_5
OPA3
Motif
Other DBs
NCBI-ProteinID:
AIQ55003
UniProt:
A0A089L781
LinkDB
All DBs
Position
complement(6249865..6250809)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEANDEGTYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTVPGVMEDVTEIILNLKALSLKIHSDEEKVFEIDAEGEGIVTAGDIRADSDVEI
LNPDLHIATLGPGARLHMRIFAGRGRGYVQADRNKRDDQPIGVIPVDSIYTPISRVNYVI
DNTRVGQVTNYDKLTLEVWSDGSIRPEEAVSLGAKILNEHLVLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTTKTEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRTEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgatagaaatcgaaaagccgaagattgagaccgtagaagccaatgatgaaggaacctat
gggaaattcgtagttgaaccgctggaacgtggatatggcacgactctggggaactcactt
cgccggattctgctgtcctccctaccgggagccgcagtgacttcggtccaaattgacggc
gttttgcatgagttctcgaccgttcctggcgtaatggaagatgtgacggaaatcatcctg
aacctaaaagctctttccctgaagattcattcagacgaagagaaagtgttcgagattgat
gctgagggtgaaggcattgttaccgcaggtgatatccgtgcggacagcgatgttgaaatc
ctcaacccggatcttcatattgcaacgctgggacctggcgcgagacttcacatgcgcatt
tttgcaggccgtggtcgcggctatgtccaagcagaccggaacaaacgcgacgatcagcca
atcggtgtaattccggttgactctatctacactccgatttcccgcgtaaactatgtcatt
gataacactcgtgtcggacaagtgactaactatgacaagctgacgctggaagtttggtca
gatggcagtatcagaccggaagaggcagtaagcctcggagccaaaattttgaacgaacac
cttgttttattcgtaggtcttacggatgaagcgaaggacgccgaaattatggtagaaaaa
gaagaagacaaaaaagaaaaagtgcttgagatgacaatcgaagagcttgatctttctgtc
cgttcctacaactgtctcaaacgtgccggtattaataccgtacaagagcttactacgaaa
actgaagaagatatgatgaaggttcgtaatctgggccgcaaatctttggaagaagttcaa
gagaagcttgaagagcttggtttgggtctgcgtacagaagaatag
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