Paenibacillus sp. FSL R7-0331: R70331_28525
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Entry
R70331_28525 CDS
T03357
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
paee
Paenibacillus sp. FSL R7-0331
Pathway
paee03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
paee00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
R70331_28525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paee03021
]
R70331_28525
03400 DNA repair and recombination proteins [BR:
paee03400
]
R70331_28525
Enzymes [BR:
paee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
R70331_28525
Transcription machinery [BR:
paee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
R70331_28525
DNA repair and recombination proteins [BR:
paee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
R70331_28525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AIQ55041
LinkDB
All DBs
Position
complement(6273384..6276995)
Genome browser
AA seq
1203 aa
AA seq
DB search
MLDVNNFEFMKIGLASPEKIRSWSRGEVKKPETINYRTLKPEKEGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLALDM
SPRSLEEIIYFASYVVTDPGETPLEKKQLLSEKEYRSYREKYGYGFQAGMGAEAVKKLLQ
DIDIEKELEFLKEELRTAQGQRRNRAIKRLEVIEAFRNSGNKPDWMIMDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPYLKMYQCGLPKK
MALELFKPFVMKELVNKGLAHNIKSAKRKVERVSPEVWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPILVEGHAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLASGNIL
NPKDGKPVVTPSQDMVLGTFYLTMDNKEEKGTGMILRNVNEAVSAYQRGTAGLHARVAIP
VKALGKTNFTEEQQNAMLITTIGKIIFNEIYPSSFPYINEATKANLLQGTPEKYFIYEKG
ADIRERIMSAEDASAVGKEYLGLIIARCFETYHTTKTSMILDKIKQLGFTYSTRSGVTVA
VSDVVVPEEKTKILEESDAKVNVVANQYRRGLITNDERYDRVIEIWSKTKDELTNILLKS
MDRFNSIMLMVDSKARGNKSQITQLGGMRGLMATPSGRIFELPIKANFREGLTVLEYFIS
THGARKGLADTALRTADSGYLTRRLVDVAQDVIVREEDCGTDKGFTVSRIQDGKEVIEDL
YDRIEGRYSFETVRHPETKEIIVHRNDLIDSDKAEEIVNAGVTKLQIRSVLSCRARHGVC
KKCYGRNLATGKFVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEL
FEARNPKGQATISEIDGVIKEIRETKDRREIEVQGEAESKTYSITYGSRLRVSEGQEIEA
GDELTDGSIDPKEMLRIKGIRGVQNYILQEVQRVYRNQGVEINDKHIEVMIKQMLRKIRI
IDAGETTLLPGAFADIQEFEAANKEAILSGKEPAVAKPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKVDKLLGLKENVIIGKLIPAGTGMNRYRNVKLSDPNAESEQEALETV
PAE
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
ttgttggacgttaacaattttgaatttatgaaaatcgggcttgcttctccggaaaaaatt
cgttcttggtcccgcggagaagtaaaaaaaccggaaaccattaactaccgcacgttaaaa
ccggaaaaagaaggcttgttctgcgagcgtatttttggaccgcaaaaggactgggaatgt
cactgtggtaaatacaaacgcgtccgttataagggcgttgtctgcgaccgctgcggcgtg
gaagttacccgcgctaaagtgcgccgcgaacgtatgggccatatcgagctggcagctccg
gtatctcatatctggtatttcaaaggcattccaagccgtatgggtcttgctctggatatg
tccccaagatcgcttgaagagatcatctatttcgcatcctatgttgtaacagatccaggc
gaaacaccgctggagaagaagcagctcctgtccgaaaaagaataccgcagctatcgtgaa
aaatacggctacggattccaggcaggtatgggtgctgaagcagtcaaaaaactgctccag
gatatcgatatcgagaaggaattggaattcctcaaggaagaactgcgcacggctcaaggc
cagcgccgtaaccgggcaatcaaacgccttgaagttattgaagccttccgtaactccggc
aacaaacctgactggatgatcatggatgtactcccggtaattccgccggagcttcgtccg
atggttcagctggatggcggccgttttgctacgtctgaccttaatgacctgtaccgccgt
gtaatcaaccgtaataaccgtcttaagagactgctggatctgggtgctcctgacatcatc
gtgcagaacgaaaaacgtatgcttcaggaagctgtcgatgctctgatcgacaacggccgc
cgcggccgtcctgtaacaggtcctggtaaccgtccgctcaaatccctcagccatatgctg
aaaggtaaacagggacgtttccgtcagaacttgctcggtaaacgtgttgactactccgga
cgttccgttatcgttgtaggaccatatctgaagatgtaccaatgcggtcttcctaagaaa
atggctctcgaacttttcaagccgtttgttatgaaagagctggttaataaaggtcttgcc
cacaacattaagagtgctaagcgcaaggttgaacgcgtaagccctgaagtatgggatgtc
cttgaagaagtaatcagagagcatccggttctgctgaaccgtgcccctacgctgcataga
ctcggtatccaggcttttgaaccgattctggtagaaggtcatgcgatccgtcttcacccg
ctcgtatgtacggcttacaacgccgactttgacggtgaccagatggcggtgcacgttcct
ctgtcagctgaagcccaggcggaagcgcgtctcctgatgcttgcatccggtaatatcctt
aaccctaaggatggtaagccggttgttactccttcccaggatatggtcttaggtacattt
tacctgactatggacaacaaggaagaaaaaggcacaggtatgatcctgcgtaatgtgaat
gaggccgtatcagcttatcagcgcggaactgcaggtctgcatgcacgtgtggctattcct
gttaaagcactgggtaaaaccaactttacagaagaacagcagaatgcaatgctgattaca
acaatcggtaaaattatcttcaatgaaatttatccgagcagtttcccatatatcaacgaa
gcaaccaaagcaaacctgctgcaaggaacacctgagaaatacttcatctacgaaaaaggc
gccgatatccgtgaacgcatcatgagtgctgaggatgcaagtgctgtaggtaaggaatat
ctcggtctgattattgcacgctgcttcgagacctaccacacaaccaaaacatccatgatt
ctggataaaatcaaacagctcggattcacgtattccacacgttccggtgtaacagttgcc
gtatcagacgttgtagtacctgaagaaaagactaagattcttgaagaatcggatgctaag
gttaatgtggttgccaaccagtaccgccgtggtctgatcaccaatgacgagcgttatgac
cgtgttattgaaatctggtcgaagactaaggatgaacttacgaacatcctgctgaagtcg
atggaccgtttcaactcgatcatgctcatggttgattccaaggcgcgcggtaacaaatcg
cagatcacccagctgggcggtatgcgcggactgatggcgacaccatccggccgtatcttt
gaattaccgattaaagcgaacttccgtgaaggtctgaccgtcctcgagtactttatctcg
acgcacggagcgcgtaaaggtcttgccgatacagcgctgcgtacagcggattccggttac
ctgacccgccgtctcgtagacgtggcccaagacgtaatcgtacgtgaagaagattgcggt
actgataaaggctttacagtaagccgtatccaggatggtaaggaagttattgaggatctg
tacgaccgtattgaaggccgctactctttcgaaactgtccgtcatccggagactaaggaa
atcatcgttcaccgtaacgatctgattgactctgataaggctgaagaaatcgtaaatgct
ggtgtaactaagctgcagatccgctctgtactgagctgccgtgcccgtcacggtgtctgc
aaaaaatgctacggacgtaacctggcaacaggtaaattcgtggaaatcggtgaagctgtc
ggcattattgccgctcaatccatcggtgagccgggaacccagcttaccatgcgtaccttc
cataccgggggtgttgccggtgatgacatcacgcaaggtttgccgcgtatccaggagttg
ttcgaggcccgtaaccctaagggtcaggctacaatcagtgagattgacggggtaattaag
gaaatccgcgaaacgaaggaccgccgtgaaatcgaggttcaaggtgaagcagaatccaag
acgtactccatcacttacggttcgcgtctgcgtgtcagtgaaggccaggagattgaagcc
ggggatgagctgacagacggttctattgaccctaaagaaatgctgcgcattaagggtatc
cgcggggtgcagaattacattctgcaggaagtacagcgcgtataccgtaaccagggcgta
gaaattaacgataagcacattgaagttatgattaagcagatgctgcgcaaaatccgtatt
atcgacgccggagagactactcttcttccgggtgcctttgcggatattcaggaatttgaa
gcagccaacaaggaagctatcctttccggtaaggagccggcagttgccaaaccagtactg
ctcggtattaccaaggcttccctggagacggattccttcctgtctgcagcatccttccaa
gaaactacccgcgtcctgaccgatgcagcaattaagggtaaagtggataaacttcttgga
ctgaaagaaaatgttatcatcggtaagctgattcctgcgggaactggtatgaaccgctac
cgtaatgtgaagctgagtgatccgaatgcagagagtgagcaagaggctctagaaacggtt
ccagccgagtaa
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integrated database retrieval system
