Paenibacillus sp. FSL R5-0345: R50345_01535
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Entry
R50345_01535 CDS
T03333
Name
(GenBank) ATP-dependent DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
paef
Paenibacillus sp. FSL R5-0345
Pathway
paef03420
Nucleotide excision repair
paef03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R50345_01535
03430 Mismatch repair
R50345_01535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paef03400
]
R50345_01535
Enzymes [BR:
paef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R50345_01535
DNA repair and recombination proteins [BR:
paef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R50345_01535
MMR (mismatch excision repair)
Other MMR factors
R50345_01535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
YdjO
AAA_30
DUF6953
Motif
Other DBs
NCBI-ProteinID:
AIQ33448
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Position
complement(329792..332104)
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AA seq
770 aa
AA seq
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MNKLLFHNIPLGATGERIPQAAVASAQTSKELVKREEGDSAYFRRLEEGGILLNRPQIAA
VRHHKGPLLTLAGAGSGKTSVLICRTGYLLSVRGVSPSQLLLLTFSSKAAAEMRERIALL
PGVSTADVARLQARTFHSFFLFFLRRQGLQQEIFSETRRQHILLKQIMRELGLPKDAYPP
ETLLSLLSSCKMNMGTVEDLPESTTAEKEMKSILEIYEQWKLDNFKIDFDDVLLIAYRML
KERPVLLQELQMRYLYVMVDEFQDTNALQYELVKMVAHPQHNLMVVGDDDQTIYSFNGAR
SEFILEFEKLYPGAKVITLDINYRSGPAIVGLGNGIIRHNTRRRSKTLQAAKGSGSQPRY
MRPQTADEEAEQMIEHILNEVSSGKREYSDFAMLYRASSSNRAVLELLLLRDIPYIDYGE
GQLLYEHWLISPVLDHLRLSVNRRNFAAMENILPTLYMNREKGMNHIRQMEARQPKQGPL
IHLLSMPGMEDFKGTKLRDRLDLIRNIRELTPIQAIRQIRTQFYDYFIEANERHQATLHR
ETLKEMLDELESSAARFDSIPAFLDFIDNVTERNEHNRQPGTKEQGNRIALMTIHKSKGL
EFPVVFLIGASEGILPHSSALEGDRLKDRKLAAGSSGASSLAALEEERRLAYVAVTRARE
ELFISSPAQHRGKKAEVSRFMLSAFRSAVSSTAATTVGRAVTTRTVTTRALPTSRTTTTK
THVVPVWNCTGSSCPGWTRMKAGGAEDHLTSKPCPLCSSPMAKDQREVPV
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
ttgaataagctcttatttcataatatcccgctgggtgctaccggcgaacgcatcccgcag
gcagctgtagcttcagcacagaccagcaaggagctggtgaagcgggaagagggagactcc
gcttatttccgtaggctggaggaaggcggcatcctgctcaaccgcccgcagattgccgca
gtgcggcatcataaagggccgctgctgacactggccggcgcaggctccggcaaaacctcg
gttctgatctgcagaaccggttatttgttgtccgtgcgcggcgtctcgccgagtcagctg
ctattgctgactttctcgagtaaagccgcggcagaaatgcgcgaacgaatcgccctgctc
cccggagtcagcacagctgacgtcgcgcggctacaggctcgtacgtttcattcttttttc
ttgtttttcttgcgcagacagggattgcagcaggagattttcagtgagacacggcgccag
cacatcctattgaagcagatcatgcgtgagctcggactgccgaaggatgcttatccaccg
gaaaccctactctcactgctctcttcctgcaaaatgaacatgggcaccgtggaagatctg
ccagaaagcaccaccgccgaaaaagaaatgaaatccattctggaaatatacgaacaatgg
aaactagacaatttcaaaatcgacttcgatgatgtcctcttaatcgcttatcggatgctg
aaggagcgtccggtgcttttgcaagagttgcagatgagatatctgtacgtgatggtcgat
gagttccaagatacgaacgccttgcagtacgagcttgtcaaaatggtcgctcacccacag
cataatctaatggtggttggtgacgatgaccagacgatttattccttcaacggagcgcgc
agtgagttcattttagagttcgaaaaactctatccgggagcaaaggttattactctcgat
atcaactaccgctcaggcccagctattgtgggacttggcaacggcattatccggcacaat
acacgccgacgctccaaaaccctgcaagccgcaaaaggtagtggaagtcagccacgatat
atgcgtccgcaaactgcagatgaagaagcggagcagatgatcgagcatattttaaacgag
gtctctagcggcaaaagagaatatagcgacttcgccatgttgtaccgggcgtcgagcagc
aatcgggccgttctcgaactactccttttacgcgacattccctatattgattatggtgaa
gggcaattactgtacgagcactggctgatctctccggtgctggatcatttgcgactctcc
gtgaatcggcggaattttgcagcaatggagaacatcctgccgacgctatatatgaatcgt
gaaaaaggcatgaatcacatccgccagatggaggctagacagcccaaacaaggaccgtta
atccacctattgtctatgcctggcatggaagacttcaagggaactaagctaagagatcgg
cttgatctaatccggaatatacgcgaactgaccccaatacaagcaattcggcagattcgt
acccaattctacgattatttcatcgaagcgaatgaacggcatcaagcaaccttacatcgc
gagacgctaaaagaaatgctagatgagctagaatcttccgcggcacgtttcgacagcatc
cctgcctttcttgatttcatagataatgtcacggagcgtaacgagcataatcgccaacca
ggtactaaagagcaaggcaaccggattgcactaatgaccattcataaatcaaaagggcta
gagttccctgttgtgtttttaattggagcgtctgaggggattcttccgcatagctctgca
ctggagggtgaccggttaaaagatcgcaagcttgctgccggaagcagcggagcttcaagc
ctagccgcgctggaggaggaacggagactggcgtatgtggccgttacgagagcccgagag
gagctgtttatcagctcacctgcacagcatcgcggtaaaaaagcggaggtttcccgcttc
atgttatccgcctttcgttcagctgtttcttccacagcagcaactacggtgggtagagca
gtaacaacaagaacagtgacgacaagagccttgccgaccagccgaacaaccacaacaaaa
acccatgtcgttccggtatggaattgcacgggcagcagctgtcctggttggacacgcatg
aaagctggcggagccgaggaccatctaacctcgaagccctgccctctatgtagctcgcct
atggcaaaggatcagagagaagttccagtatga
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