Paenibacillus sp. FSL R5-0345: R50345_04700
Help
Entry
R50345_04700 CDS
T03333
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
paef
Paenibacillus sp. FSL R5-0345
Brite
KEGG Orthology (KO) [BR:
paef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paef03016
]
R50345_04700
Enzymes [BR:
paef01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
R50345_04700
Transfer RNA biogenesis [BR:
paef03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
R50345_04700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
Motif
Other DBs
NCBI-ProteinID:
AIQ34001
LinkDB
All DBs
Position
1055674..1056276
Genome browser
AA seq
200 aa
AA seq
DB search
MNANVSDKDSERLFIAVKLPSALQQVVAEECSKLSQEYHFAKWTHPADYHITLQFLGDTP
KTKIPDLIMALKQMAGQCRPFKLSLDKWNTFGLPKAPRVLWVGVSGELEELNLLAERVHT
ATLPLGFSAESREYKPHLTVARKYLGKISFDDKLLENLLKLDDEKRSEIFHRDWTIDSFV
LYATRMYAIPMYEMIENITF
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctaacgtgtcggataaagattcagaacggttgtttattgctgtgaaattaccc
tcagcacttcaacaagttgtggcggaagagtgctctaaactatctcaagagtatcatttt
gcaaaatggactcatccagcggattatcatattaccctgcaatttttgggagacactcca
aagacgaagatcccggatttaatcatggcgttgaagcagatggcagggcaatgccgcccc
tttaaactatccttggacaaatggaatacatttggtcttccaaaggctccaagagtgtta
tgggtaggggtttctggtgaattagaggagctgaatttactagctgagagagtacacact
gcgacacttccattaggattttcagccgaatctagggagtacaaaccgcatctcacagtg
gcacgaaagtaccttggaaaaatttcatttgatgataaattgctggaaaacttactgaaa
ttggatgatgaaaaaagatcagaaatctttcatagagactggacgattgatagttttgtg
ttgtatgctaccagaatgtatgccattcctatgtatgaaatgattgaaaatattacattt
taa
DBGET
integrated database retrieval system
