Paenibacillus sp. FSL R5-0345: R50345_09575
Help
Entry
R50345_09575 CDS
T03333
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
paef
Paenibacillus sp. FSL R5-0345
Pathway
paef03030
DNA replication
paef03430
Mismatch repair
paef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R50345_09575
03430 Mismatch repair
R50345_09575
03440 Homologous recombination
R50345_09575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paef03032
]
R50345_09575
03400 DNA repair and recombination proteins [BR:
paef03400
]
R50345_09575
Enzymes [BR:
paef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R50345_09575
DNA replication proteins [BR:
paef03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R50345_09575
DNA repair and recombination proteins [BR:
paef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R50345_09575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
DUF6282
Motif
Other DBs
NCBI-ProteinID:
AIQ34838
LinkDB
All DBs
Position
2150451..2154089
Genome browser
AA seq
1212 aa
AA seq
DB search
MSPFVHLHVHSEYSLLDGAARITDLVRRAGEYGMKSLALTDHGVMYGAIPFYKACKENGI
KPIIGCEAYLTAGSRRERGSRKDQPIYHLILLVKNETGYKNLMKLISIGHLEGHHYKPRI
DMEVLAAHSEGIICLSACLGGEVPQHLLHGRDDEARKAALRYKEIFGEDFYLELQDHGIS
EQKRVNPKLIALAKACDIPLVATNDVHYLAKEDAEVQDVLICIGTGKTVDDEERLKIGTD
QLFLKSSEQMAALFPHVPDAISNTLLIAEKCNLELTFGQHILPAYSPIPEGMDSAAYLRE
LCFRGLEERYIDTPLWVSPEQRETAEKRLAYELGVIESMGFSDYFLIVWDFIAYCHRQGI
ATGPGRGSSAGSLTAYSLRITDVDPLKYNLLFERFLNPERITMPDIDIDFSDERRDEVIA
YVVEKYGKEHVAQIITFGTMAARAAVRDVGRVLNLPYNEVDKAAKLIPGQLGISLARALE
TTPDLKALYDSNPKIKGLLDMAMKVEGMPRHASTHAAGVVISKGPLTDAVPLQEGNESTA
LTQYSMEHLESVGLLKMDFLGLRTLSIIERCMNSIKEMSGSVPNFKTIPDHDPLTYEMLG
AGETTGVFQLESAGVRRVLKDLKPNGFEDIVSVLALYRPGPMEFIPKYIAGKHGQIEVEY
PHSDLKSILADTYGIIVYQEQIMQIASLMAGFSLGEADLLRRAVSKKKRETLDKERSHFV
QGSLQQGYNEADANAVYDMIVRFADYGFPRAHAAAYGVLAFQTAYLKAHYPVQFMASMLT
AVMGTHRKVAEYVLDCRRTGIGVLPPDVNESGVLFTPVPGEETGTGHIRFGLAAIKNVGT
LAVENIMSVRKERPFDSLLDFCRRVDLRVCNKRVVESLLQAGAFDCLPGHRAQLLAMLDE
TVDAALKWRKERDELQIQLFDDLVETPNWEIRYPDIPKFTVGQQLEMERELLGLYLSGHP
LDDSAELLEEPGIQRLMDLGEAADESQTVTAGMVVSVKEITTKQGKSMAFIEWEDQIERC
EVVLFPEVWKRSRSLIAKGALLALRAKVQQEDEGFKLLAEEVALLSAETLRGLLQRRSAA
ASRSYSAGRSASAGAPPRGGAPASRASGAATGPAGRPAGGAAAPATPAPAAAQAPVSGQR
VFIKITPAAENAAQLSRLKELLQNHPGPVATILFYERDQKLLALSDNYRIKPTQELFAAI
ESMLGAGTVRIK
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgagccctttcgtgcatttgcatgtgcacagcgaatacagtttactggacggggcggcg
cgcattaccgatctcgtgcgccgggccggcgaatacggcatgaagtcgctggcgcttacg
gatcatggagtgatgtatggggcgatccccttttataaagcgtgtaaagagaatggaatc
aagccgattatcggctgtgaagcttatttaaccgcaggctctcgccgagagcggggcagt
cgcaaagatcaaccgatttatcacctgattctgctcgtcaagaatgaaaccggctacaag
aatctgatgaagctgatctctatcggccatctggaaggccatcactataaacctcgtatt
gatatggaggttctggccgctcattcggaggggatcatatgccttagtgcatgtctaggc
ggcgaagtgccgcagcatctgttgcatggaagagatgatgaagcgcgaaaggctgcgctg
cgatataaggagatttttggcgaagacttctacctggagcttcaagatcacggaatttcc
gagcaaaagcgagtaaatccgaagctgatcgcacttgccaaggcctgtgatatcccactc
gtagctacgaatgacgttcattatttagctaaggaagatgcagaggtacaggatgttctg
atctgtattggaacaggtaaaactgtggatgatgaggaacggctcaagatcggaacagat
cagttatttttaaaaagcagtgaacagatggcggcgttattcccgcatgtgcctgatgct
attagtaacacgctactgatcgcagaaaaatgtaatctggagcttaccttcggtcaacat
attctgcctgcttattcaccgattccggaaggtatggactctgctgcatatttgcgtgag
ttatgctttagggggcttgaagaacgatatattgacacaccactatgggtatcgcctgag
caaagagagactgctgagaagcgtcttgcctatgagcttggtgtcatcgagagtatggga
tttagcgattattttctaattgtgtgggattttatcgcttattgtcatcgtcaggggatt
gctacaggaccgggccggggttcctccgcggggagtcttaccgcttactccctacgaatc
acggatgttgatccgcttaagtataacttgctctttgaacgtttcttaaatccagaacgg
atcacgatgccggatattgatatcgattttagtgatgaacgccgtgatgaggttatcgct
tatgtggtggagaaatacggcaaagaacatgtggcacagattattacatttggaaccatg
gctgcacgggctgcggttcgtgatgtgggcagggtgctgaatttaccttataacgaggta
gacaaagctgccaagctcatcccaggacaactaggcatcagcctcgctagagcactagag
actactccagatcttaaagcgctatatgacagtaatccgaagatcaagggcttgctggat
atggcaatgaaagtggaaggaatgcctcgtcatgcttcgacacatgctgccggggttgtc
atttccaaaggtccgctaactgatgctgtacccctccaggaaggtaacgaaagcacagct
ttaactcagtactctatggagcatttggagagtgtcgggctgttgaagatggattttctg
ggcttgcgtactttgtcgattatcgaacgctgtatgaattcgattaaagaaatgagtggc
agtgttccgaatttcaaaacgataccagatcatgatccccttacgtatgaaatgctaggt
gcaggggagacgactggggtcttccaactggaatcggcgggtgtaagacgtgtgctgaag
gatttgaagcctaatggttttgaagatatcgtatcggttctagcgctgtatcgtccgggt
ccaatggaatttatcccgaaatatatagcaggaaagcacggccagattgaagtagagtac
ccacattctgatttgaaatctatattagcggatacctatgggattattgtgtaccaggaa
cagattatgcagattgcttcgcttatggccggattctcgcttggtgaagcggatctgctc
cggcgagcggtctctaagaagaaacgtgagacgctggataaggaacgcagccattttgta
caggggagcttgcagcaaggatataacgaagcggatgcgaatgccgtttatgatatgatt
gtaaggtttgccgattatggtttccctcgtgcgcatgcggcggcttatggtgtgctggct
ttccagacggcatatctcaaggcgcattatccggtacagtttatggcatctatgctgacg
gctgtaatgggcacccaccgtaaggtggcggagtatgtactggactgccgccgcacgggc
atcggcgtgttaccgccggatgtgaacgagagcggcgtgttgtttaccccggttccaggg
gaagaaacgggaacagggcatatccgctttgggctcgcggcgattaagaatgtcggaacg
ttagcagtggagaatattatgtcggtccgtaaggagcggccgttcgacagtctgctcgat
ttctgtcgacgagtcgatctgcgggtctgcaacaagcgggtagtggagtctttgctgcag
gcaggagcttttgactgtctgccgggtcatagagcccagctgctcgctatgctggacgag
accgttgacgccgcgctgaaatggcgcaaggagcgggatgagctgcaaatccagttgttc
gacgatttggtggaaacgccaaactgggagattcgctatccggatatccctaagttcaca
gtaggacagcagctggagatggaacgtgagctgctggggctgtatctatcaggtcacccg
ctcgacgatagcgctgagctgcttgaggagcccggtatacagcggctgatggacctcggt
gaagccgcagatgagagtcagacggttacggccggcatggtcgtatccgtgaaggaaatt
acgacgaagcaaggaaaatcgatggccttcatcgaatgggaagatcagatcgaacgctgc
gaagtcgtgctcttccccgaggtgtggaagcgaagccgcagcttgattgccaagggcgcg
ctgttagccttgcgcgccaaggtgcagcaggaggacgaaggcttcaagctgctggccgag
gaagtggcgctgctctccgcggagacactccgcggcctgctgcagcgccgtagtgccgcc
gcgtcccgctcttatagcgcgggacgctcggcctcagcaggagcaccgccgcgcggcggc
gctcctgcttcgcgggctagcggggccgccactggccccgcgggcagacctgcaggcggc
gcagctgcgcctgcaacacctgcaccggccgctgcgcaagcgccggtctcaggccagcgt
gtctttatcaagatcacgccggccgccgagaatgctgcgcagctgtcgcgcttgaaggag
ctgctgcagaatcatccaggcccagtagcgacgattctgttctacgaacgggatcagaag
ctcctggcccttagcgataactaccggatcaaacctactcaggagctgttcgcggctatc
gagtctatgctgggagcaggtaccgtaagaataaaataa
DBGET
integrated database retrieval system
