Paenibacillus sp. FSL R5-0345: R50345_09700
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Entry
R50345_09700 CDS
T03333
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
paef
Paenibacillus sp. FSL R5-0345
Pathway
paef03030
DNA replication
paef03410
Base excision repair
paef03420
Nucleotide excision repair
paef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R50345_09700
03410 Base excision repair
R50345_09700
03420 Nucleotide excision repair
R50345_09700
03440 Homologous recombination
R50345_09700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paef03032
]
R50345_09700
03400 DNA repair and recombination proteins [BR:
paef03400
]
R50345_09700
Enzymes [BR:
paef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R50345_09700
DNA replication proteins [BR:
paef03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
R50345_09700
DNA repair and recombination proteins [BR:
paef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
R50345_09700
NER (nucleotide excision repair)
GGR (global genome repair) factors
R50345_09700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AIQ34861
LinkDB
All DBs
Position
2177562..2180231
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AA seq
889 aa
AA seq
DB search
MDKLILIDGNNIIYRAFFAMPPLTNTAGQQTNAVYGFTTMLLRLIEEHKPTHMIVAFDAG
KVTFRHEGYEDYKGGRQKTPPELSEQFPLLKELLTNLGVPQFEISNYEADDIIGTISRQA
DEAGRQVMIVSGDKDMLQLASEHTTVALIRKGVTEVELYGPEQIREKYDLTPEQIIDLKG
LMGDASDNIPGVPGVGEKTALKLLHQFGSVEGVLAGTGELKGKMKEKLEAHAEDAVMSKK
LATIYREVPLEHSWDDMVFNGISADTAGPALAKLEFKSLLERLDLSAYTPVNDGEEGAAE
VEAATLDITIVGENELETLNEALPSISALHVESNGDNPHRAEVIGVGLSSLERHYYVPFE
LLQTPAAAKLRDWLGNEKAPKSGYDLHRADLALHWQGIAFAGAAHDVQLAAYLLDPTEAN
QNLNDLATKYGLPRLSPDEEVFGKGAKYKIPELEILGNHVARKSAAVLGIAQKQQQELVE
TAMTGLFEDLEMPLSRILADMEKQGIAVNEEDLKELGKEFEAQISKLVTEIYELSGTEFN
LNSPKQLGEILFVKLGLPVVKKTKTGYSTDAEVLEKLAPYHDVVRLILQYRTIAKLQSTY
VEGLLKEISPKTGKVHTFYRQTIAATGRLSSQYPNLQNIPIRLEEGRKIRKVFVPSEPGW
SILAADYSQIELRVLAHISGDERMKEAFLHDMDIHTKTAMDVFGVTADQVDSNMRRAAKA
VNFGIVYGISDYGLSQNLNIPRKEAAQFIEQYFEVYQGVRRYMDDIVVEARKHGYVTTLL
ERRRYLPEINAKNFNLRSFAERTAMNTPIQGTAADIIKLAMVHMDKALYERGLKSRMLLQ
VHDELVFEVPEDEMELMKTLLPEVMGGALQLSVPLKAEVSFGSNWYEAK
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggacaagttgatacttatagatggaaataatattatttaccgcgctttcttcgcgatg
cccccgttaacgaatacagcagggcaacagacgaacgcggtgtacggtttcacaacgatg
ctgctccgtttaattgaagaacataagccgacgcatatgattgttgcatttgatgcaggg
aaagtcacattccggcatgaaggttatgaggattataaaggcggtcggcaaaagacacct
ccggagctctccgagcagttcccgctattgaaagaattgctcactaatctaggggtaccg
cagtttgaaattagcaattatgaggccgatgatattattggaaccatttctcgccaagcc
gatgaagcaggccggcaggttatgatcgtgtcgggggataaggatatgcttcaattggct
tctgaacacacgaccgttgcgctaatccgcaaaggagttactgaggttgagctttatgga
ccggaacaaattcgtgagaaatatgacctaaccccagagcagatcatagaccttaaagga
ctgatgggcgatgcgagtgataacattccgggagttcccggtgtgggtgaaaaaactgca
ctcaagctgttgcatcaattcggatcggttgaaggtgtattagcgggaacaggtgagctt
aaaggcaaaatgaaagaaaagctggaagctcatgcagaagacgctgtaatgagtaagaaa
ctggcgaccatctatcgtgaagtgcctctggagcattcatgggatgatatggtctttaac
ggaatttctgcggatacagctgggcctgcactcgctaaattggagttcaaatcacttttg
gagcgcttagatctaagtgcctacactcctgttaatgatggtgaagaaggtgctgcagaa
gtagaagccgcgacccttgatattacgatcgtgggtgaaaatgaactggagacgctgaat
gaagcgctgcctagtatttctgcattacatgtggagtccaatggggataatccgcatcgt
gctgaggtaatcggggtagggttatcttctctggagcggcattattatgtaccgtttgaa
ttactgcagacaccagctgctgcgaagctgcgcgattggttaggaaatgaaaaggctccg
aagagcggctatgatcttcatcgtgcagatttggcgctccattggcaaggcattgctttt
gcaggtgcggctcatgatgtacagttggcggcttatttgctggatccgacggaagcaaat
cagaacttaaatgatctagctactaaatacggcttaccacgcttatctccagatgaagag
gtattcggaaaaggcgctaaatacaagattcctgagcttgaaatcttaggaaatcacgtc
gcacgtaagagtgctgcggttctcgggattgctcagaagcaacaacaggagcttgtcgag
acagcgatgaccggactgttcgaagatttggagatgcctttatcacgtattctcgcggat
atggagaaacaaggaatcgcagtcaacgaagaggatcttaaagagctaggtaaagaattc
gaagctcaaatttctaagttggtcactgaaatatacgaattaagtggcacggagttcaat
ttgaattcaccaaagcaactgggtgaaattttattcgttaagctaggtttgcctgttgtt
aagaagacgaagacaggctattccactgatgctgaggtgcttgagaaactagcgccttat
catgacgtggtacgtttgattttgcaatatcgcacgattgcgaagctccagtctacatac
gtagaaggacttcttaaagaaatatctccgaaaacagggaaggtgcataccttctatcgg
cagacgattgcggctaccggacgtctcagcagtcaatatccgaacctgcagaacattcct
atccgcctagaggaaggacgcaaaatccgtaaggtgttcgttccgtccgaaccgggctgg
tcgatcttggcagcggactattcgcagatcgaactacgagtattggcacatatctctggt
gatgagcggatgaaggaagcttttctacatgatatggatatccatacgaagacagcgatg
gatgtgtttggagttacggctgatcaggttgatagcaatatgcgccgtgctgctaaagcc
gttaactttgggatcgtgtatggaatcagtgattatggtctgtcgcagaacttgaatatt
ccccgtaaagaagccgctcaatttattgagcagtattttgaggtatatcagggcgttcgg
agatatatggacgatatcgtagtagaagcacggaaacatggttatgtaaccacattactg
gaacgtcgtcgttacttgcctgagattaatgcgaagaactttaatctacgttcttttgca
gaacgtacggcaatgaatacacctatccaaggaactgccgctgatattattaagctggcg
atggtgcatatggacaaggcgctttatgagcgcgggctaaagagccgtatgctgcttcag
gtgcacgatgagcttgtattcgaggtaccagaggatgaaatggagctcatgaagacgctt
ttgccggaagtgatgggtggagcattgcagttatctgtaccgcttaaagcagaggtaagt
tttggtagcaattggtacgaagcgaaatag
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