Paenibacillus sp. FSL R5-0345: R50345_10885
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Entry
R50345_10885 CDS
T03333
Name
(GenBank) RNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
paef
Paenibacillus sp. FSL R5-0345
Brite
KEGG Orthology (KO) [BR:
paef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paef03009
]
R50345_10885
Enzymes [BR:
paef01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
R50345_10885
Ribosome biogenesis [BR:
paef03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
R50345_10885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF2100
Motif
Other DBs
NCBI-ProteinID:
AIQ35067
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All DBs
Position
2457795..2458559
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AA seq
254 aa
AA seq
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MSQSGKPAKKQRLDKVLSHIGVGSRSDIRKQAKQGLILVNGTVVKDSGYHVDPYADKIEV
GGEAVTYREFIYLMMNKPPGVLSATEDKRDRTVLDLLKHEYAQFEPFPVGRLDKDTVGLL
LITNDGKLAHELLSPRKHVPKTYEATIEGDVDADDVAAFAAGVELEDGYVTLPAHLTILG
RERGSKVISHISLIITEGKFHQVKRMFQAVGKKVTFLKRVSMGELKLDESLPLGACRELT
SEELALLGADGSEG
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatcaggtaagcccgccaaaaaacaacgattagataaagtattgtcccatatt
ggagtggggtcgcgcagtgatatccgtaaacaagctaaacaaggcttaatattggtgaac
gggacagtggtaaaagatagtgggtaccatgtggatccttatgccgataaaatagaggta
gggggagaggctgttacctaccgtgaattcatatatcttatgatgaacaaacccccgggt
gtcctgtcagctacggaggacaagcgggatcggacagttttggatcttttaaagcatgaa
tatgcacagtttgaaccgtttcctgtaggaaggctagataaggatactgtgggactgctt
ctgatcactaatgatgggaagcttgcccatgaattgctgtcgccacgtaagcatgtcccg
aaaacgtacgaggcaaccatcgagggcgatgtagacgcggatgatgtcgcggcttttgca
gcaggggtggagctggaagatggctacgttactttgcctgcacacttaaccattcttgga
agagagcgcggcagcaaagtgatttcccatatttcacttatcattactgaggggaaattt
catcaggtgaagcgtatgtttcaggcggtaggcaaaaaagtcacttttctgaaacgtgta
tctatgggagaattgaagcttgatgaaagtctgccgctgggagcttgtcgggaactgacg
tcagaggagctggcactcttaggggcagatgggtcagaaggatag
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