Paenibacillus sp. FSL R5-0345: R50345_12460
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Entry
R50345_12460 CDS
T03333
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
paef
Paenibacillus sp. FSL R5-0345
Pathway
paef03022
Basal transcription factors
paef03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
paef00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
R50345_12460
09124 Replication and repair
03420 Nucleotide excision repair
R50345_12460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paef03021
]
R50345_12460
03400 DNA repair and recombination proteins [BR:
paef03400
]
R50345_12460
Enzymes [BR:
paef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R50345_12460
Transcription machinery [BR:
paef03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
R50345_12460
DNA repair and recombination proteins [BR:
paef03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
R50345_12460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIQ35350
LinkDB
All DBs
Position
2792430..2794142
Genome browser
AA seq
570 aa
AA seq
DB search
MNETGACIVRRDRTILLECAHPGFEKARKELGTFAELVKSPPAYHTYRITPLSLWNAAAL
NYTAEAIISSLHHLARWGVPAGLEEEIGTLLSRYGKLTLHGQKTSNEIITLKADSAEILD
ELGNESVLKALGLQRINPLESTCRAKNRGLLKQELMRLGYPVLDYAGYHVGQELNLAWKE
NGNNAKDGAKGEAFGLREYQQEAVQMFQGIEGQGGSGVVVLPCGAGKTLVGLAVLESLQC
ETLILTSNTTSVRQWVDELLERTDLDDESIGEYSGEKREVRPVTIATYQILTHRQSKGGP
FLHMKLFNERNWGLIIYDEVHLLPAPVFRATADIQATRRLGLTATLVREDGKEGDVFSLI
GPKRYDMPWKELEQQGWIAEVECVEMIVPMCSELRQKYLYAEAKEKFRMASCNPAKVEVV
IELLKAHQGSSVLVIGQYLDQLTELADKLDAPLITGKTKQRERDELYAAFNEGIIQVLVV
SKVANFAVNLPDASIAIEVSGAFGSRQEEAQRLGRILRPKAGENKAYFYSLVSEDSREQD
FAMRRRMFLTEQGYEYVVKMVPSGKERTIH
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaacaggggcttgcattgtgcgcagggatcggacgattctactggaatgcgca
catcctggttttgagaaggcgaggaaggagctaggaacctttgcagagcttgtaaagagt
cctccggcttaccacacctatagaatcactccattatcactatggaatgctgcagcgctt
aattatacagctgaggcaattatctcaagtctgcatcatctcgcacgctggggtgttcct
gcagggctggaggaagagatcggaacgcttctctctaggtatgggaagctgactcttcac
ggacagaagacttcgaatgagatcattacgcttaaggctgactcagctgaaatactggat
gaactagggaatgaatctgttctaaaggcattaggtttacagaggataaatccactagaa
agcacatgccgtgcaaagaacagagggcttttaaagcaagagctgatgagactaggctat
cctgtactggattatgcgggttaccatgtcggacaagagctaaacttggcatggaaggag
aacggaaataacgcaaaggatggagcgaaaggtgaagcttttggactgcgtgaatatcag
caggaggccgttcagatgtttcaaggcatagaagggcagggaggcagcggggtagttgta
ttgccttgcggagcgggtaagacgttagtcggattagccgttcttgaaagtctacaatgc
gaaacactgatcttaacttcaaatacgacttctgtaagacaatgggtagatgagctgctt
gagcgaaccgatttggatgatgagtctattggtgaatattccggtgaaaaaagagaagtg
cggcctgttactatagctacctatcagatactaacgcaccgtcaatccaaaggcggtcct
tttctccatatgaagctgttcaacgaacgcaactggggtttgattatttatgatgaggtc
catctgcttccagccccagtcttccgggctacagcagatattcaggctactagaagacta
ggtctcactgcaactctggttagagaagacgggaaggaaggggacgtattctcattgatc
gggcctaagcgttacgacatgccttggaaggagctggagcagcagggctggattgcagag
gttgaatgtgtcgagatgatcgtaccgatgtgttctgagttaaggcagaaatacttgtat
gcggaagcgaaagagaaatttcgtatggcctcatgcaatcctgccaaagttgaggttgta
attgagcttttaaaagcccatcagggatcatcagttctggttatcggacagtatcttgat
caattaacggaattagcggataagttagatgcaccgttgattactggcaaaacgaagcag
cgagaaagagatgagttgtatgcagcttttaacgagggaataatacaggtgcttgttgtc
tctaaagtagcgaattttgcggttaatttgccagatgcgtcgatagctattgaggtttca
ggagcttttggatccagacaggaggaggctcagcgtttaggacgaatcttgcgtccgaaa
gctggtgagaataaagcgtacttctattcgctggtatctgaagatagtcgggagcaggat
ttcgctatgcgccgccggatgtttttgacagaacagggctatgaatatgtcgttaaaatg
gtgccgagcggaaaggagcgaacgatccattga
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