Paenibacillus sp. FSL R5-0345: R50345_17015
Help
Entry
R50345_17015 CDS
T03333
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
paef
Paenibacillus sp. FSL R5-0345
Brite
KEGG Orthology (KO) [BR:
paef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paef03016
]
R50345_17015
Enzymes [BR:
paef01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
R50345_17015
Transfer RNA biogenesis [BR:
paef03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
R50345_17015
Prokaryotic type
R50345_17015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AIQ36178
LinkDB
All DBs
Position
complement(3740906..3741853)
Genome browser
AA seq
315 aa
AA seq
DB search
MELYFLGTNAGVPTLQRNVTSIALRLLEERRSIWMFDCGEGTQHQVLRSPIRLGKLEKLF
ITHLHGDHLFGLPGLLSSRGYQGGTSPLTVYGPPGLKAYLDISLAVSQSRIPYKIEIVEH
TGGTVFEDDGFKVEAALLEHRIDSYGYRVTEKDSPGSLNTELLKSYGLKPGPIYGKLKKG
EDVITDEGIRICAADVVREPKRGRIITILGDTRPCSGALELSLDADLIVHEATFGHDLAE
MAYQYHHSTARQAAELAKEANAGQLLLTHFSSRYSSSEELIPLLEEAELVFPETLLAEEF
STYPIYRRQNGQLGK
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggaattatattttttgggtacgaatgcaggggtaccgactctgcagcgcaatgtaacg
tcgattgcattaagactactggaagaacgccgtagtatttggatgttcgattgcggagaa
ggaactcagcatcaggttcttcgttcaccgattcgcctaggaaaactggaaaagctattt
attactcacttgcacggagatcatctatttggccttccaggtttgttatcgagtcgtggt
tatcagggagggacctcgccgttaacggtttacggaccacctggattgaaagcatactta
gatatatccttagctgtgagtcaatctcgtattccatacaaaattgagattgtcgagcat
accggaggaacggtattcgaggatgatggctttaaagtggaggcggcattattagagcat
cgtattgacagctatggttaccgggtaacggaaaaggatagtcccgggagcctcaatacg
gaattacttaagagttatggtttgaaacctggaccgatatatggaaaattaaaaaaaggt
gaagatgttataacggacgaaggtattcgtatctgcgcggctgatgttgtcagagagcct
aaaagagggcgtattattacgatcttaggtgatacaagaccttgttctggagctttagaa
ctctcacttgatgcagaccttatcgttcatgaagcaacctttgggcatgatctggcagaa
atggcttatcagtaccatcacagtacagcacgtcaagctgcagagctagcaaaggaagcc
aatgcaggtcaactattgctcactcatttcagctctcggtacagctcgtctgaggagttg
attcctttgctggaagaagctgagctcgtttttccagagacattgttagctgaagaattc
agcacatatccaatttatcgaagacaaaacgggcaattggggaaatga
DBGET
integrated database retrieval system
