Paenibacillus sp. FSL R5-0345: R50345_23085
Help
Entry
R50345_23085 CDS
T03333
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
paef
Paenibacillus sp. FSL R5-0345
Pathway
paef00470
D-Amino acid metabolism
paef00550
Peptidoglycan biosynthesis
paef01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paef00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
R50345_23085 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R50345_23085 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paef01011
]
R50345_23085 (murD)
Enzymes [BR:
paef01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
R50345_23085 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
paef01011
]
Precursor biosynthesis
Amino acid ligase
R50345_23085 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Pyr_redox_3
ADH_zinc_N
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
AIQ37256
LinkDB
All DBs
Position
complement(5056991..5058412)
Genome browser
AA seq
473 aa
AA seq
DB search
MKHPDMYRGEEVVVLGLAKSGVQVAKVLHDRGAVVTVNDKKERDQSPEASELESLGICVI
SGGHPDGLIHEGVSLVIKNPGIPYSAPPVQKALELGIEVVTEVEVAYRLCAAPMIGITGS
NGKTTTTTWVGQMLEAAGMNPIVAGNIGTPLCEAAQEATEDNWMVVELSSFQLKGTETFR
PKIGCLLNIAETHLDYHGSMKDYVDSKAKLFANQVATDTAVLNWDDPFCRELVPYMKATI
LPFSMSEELTHGVFVSPSYITDQDDDLKRRIIYRESAEQETIIADVDSIGLPGRFNVGNA
LAACAIAIAAGADPSLLGEVLASFRGVEHRLEYVADKAGATYYNNSKATNSKATIMALTS
FKRPVVLIAGGLDRGSDYLELLPVLSGRVKALVALGETKDKLTNVAQLAGLKQIISVDNG
ESAAAVLEQAVQEASALAEEGDIVLLSPACASWDMFTSYEERGRIFKEAVHNL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatccagatatgtatcgtggtgaagaagttgtagttcttgggctcgcaaaaagc
ggtgtccaggttgctaaagtgctgcatgatcgaggcgctgtagttacggtgaacgataaa
aaggaaagagatcaaagtcccgaagcttccgaattggaatctttgggaatttgtgttata
agcggtgggcatccggatggactgattcatgaaggtgtaagtctggtcattaagaatcca
ggcattccttattctgcgcctcctgtgcaaaaggctcttgagcttggcattgaagtagtt
acagaggtagaggttgcttaccgtctttgtgcagcgccgatgattggcatcacgggatcc
aatggcaagacaacaacgacgacctgggtgggtcaaatgctggaagccgcaggtatgaat
ccgattgttgcaggtaacattggcacgcctctctgtgaggctgcgcaagaagctacagag
gataactggatggtggtcgaactcagcagcttccagctcaaaggtacggaaactttccgc
cccaaaataggctgtttgttgaatattgcggagacccacctggattatcatgggagcatg
aaggattatgtcgattccaaagcaaagctgttcgctaatcaagtagctacggatacggct
gtgctgaactgggacgatcccttttgccgggaacttgtgccatatatgaaggctactatt
cttccgttctctatgtccgaggagctcactcatggtgtgtttgttagcccgtcctatatt
acggatcaagacgacgacctgaagcgccggatcatctaccgcgaatctgcagaacaagaa
acaatcattgctgatgtagattccattggccttccggggcgtttcaacgtgggaaatgca
ctggctgcatgtgccattgccattgctgctggagctgacccttctttattgggcgaagtg
cttgcttcgtttcgcggtgtggagcaccggctggagtatgtagctgataaggctggggcc
acttattataataattccaaagcaacgaactccaaagcgacgattatggcattaacgtcc
ttcaaacgccccgtagtgctgatcgctggcggattagaccgtggttccgattatttggag
ctgctgcctgtcctgagcggtcgtgttaaagcgctagtagcgttaggggaaactaaggac
aagctaacgaatgtagcgcagctggcaggattaaagcagattatctccgtcgataatggg
gagagtgccgccgccgtgcttgagcaagctgtgcaggaagcttccgctctggcggaagaa
ggagatatcgttcttttgtctcctgcatgtgcaagttgggatatgtttacatcctatgaa
gagcgcgggcgtatttttaaagaggcggtgcataacctttaa
DBGET
integrated database retrieval system
