Paenibacillus sp. FSL R5-0345: R50345_23105
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Entry
R50345_23105 CDS
T03333
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
paef
Paenibacillus sp. FSL R5-0345
Pathway
paef00550
Peptidoglycan biosynthesis
paef01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paef00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R50345_23105
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paef01011
]
R50345_23105
Peptidoglycan biosynthesis and degradation proteins [BR:
paef01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
R50345_23105
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AIQ37260
LinkDB
All DBs
Position
complement(5062349..5064274)
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AA seq
641 aa
AA seq
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MKVSKVVTRRRMLWTLLGLAVLFGSLVVRLAYVQLSQGEKLSDKVEDSLRRNIPFTAKRG
EILDREGIPLAYNISTPTVYAVPVQVKEKEKTAQQLAPLLGMTEEKLMSLLTKKSMSVKL
QPGGRKITMELAASIRDLQLPGIVVAEDSKRYYPYGDLAAHILGFTGIDNQGITGVENIY
DNLLKGIAGNISYLSDAGGRLMPGSSEKYSAPQDGLNLQLTIDKQIQSIMERELDQAMVK
YQAQGAWAIAMNPKNGEILAMASRPGYEPGLYKEYDPQIYNRNLPIWMTYEPGSTFKIIT
LAAALQEGKVDLQNDHFYDPGFIEVAGAKLRCWKKGGHGSQTFLQVVENSCNPGFVALGQ
RLGKETLFKYIRDFGFGSKTGIDLNGESNGILFKLNQVGPVELSTTAFGQGVSVTPIQQI
AAVSAAINGGNLYKPHVSKAWVNPETGETVSEVKPELVRQVISEETSKKVRAALESVVAK
GTGRPAFIDGYRVGGKTGTAQKVINGRYSPTEHIVSFIGFAPADDPQIVVYTAVDNPKGI
QFGGVVAAPIVQNILEDSLHYMKVPERSDQLPKTYKYGETPIVTVPDLTGATVQDIYEDL
NMNFNLARSGSGNTVINQAPKAGARVEQGSTIRIYMGASSE
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttcgaaagttgtaacacggcggagaatgctgtggacgctgctgggactggca
gtgttattcggttcgctggtcgtgcgtcttgcttacgtgcaattatcccaaggcgagaaa
ttaagtgacaaggtagaagattccttgcgccgcaatattccttttaccgccaagcgtggt
gaaattttggatcgtgaaggaataccgctggcctataatatcagcacacctacagtttat
gcggtgcctgtgcaggtaaaggagaaggaaaagacagcgcagcaattggcgcctctgctt
gggatgaccgaggagaagctgatgagcttgctgactaaaaaatcaatgtcggtgaaactt
cagcccggcggccgcaaaattacgatggaacttgccgcgagcatccgtgatttgcagttg
ccgggcatcgttgtcgctgaggatagcaaaaggtattatccttacggcgatcttgccgca
cacatcctaggctttacaggtattgataaccaagggattaccggagtcgagaacatatac
gacaatttgcttaaaggcatagcaggcaatatttcgtatttgtctgatgcaggtggaaga
ctcatgcctggatcatcggagaagtattctgcccctcaggatggacttaatctgcaattg
acgattgataaacagattcaatccattatggagcgcgagcttgatcaagctatggtaaaa
tatcaggcgcagggtgcttgggctatagcgatgaatccgaagaatggtgagattctggcc
atggctagtagacctggttatgaaccggggctatataaggaatatgatccacagatctat
aatcggaatttgcccatttggatgacctacgaacctggttcgacgttcaaaatcatcaca
ctggctgcagcactgcaagaagggaaggtagacctgcaaaatgatcatttctatgatccc
gggtttatcgaagttgcaggtgcaaagctgcgctgttggaaaaaaggcgggcacggcagt
caaacctttctacaagtagttgagaactcctgtaaccccgggtttgtcgctcttgggcaa
cggttgggaaaagaaacgctcttcaaatatatccgtgattttggcttcggcagcaaaacc
ggaattgatttaaatggagaatctaatgggattctgttcaagctcaatcaagtaggtccg
gtagaactctcgactacagccttcggccaaggggtctcggttacgcctattcagcagatt
gctgcggtatcggccgctattaacggtggtaatctctataaaccgcatgtatcaaaagca
tgggtgaatccggaaactggtgaaaccgtatcggaagtaaagccagagcttgtacggcaa
gttatttcggaggaaacgtctaagaaggtgcgggcagcacttgagagcgtagttgccaaa
ggcacgggacggccggctttcatagacggctatcgtgtaggtggtaagacgggtactgca
caaaaggtcattaacggacgttattctccaacggagcacatcgtttcttttataggtttt
gcacctgcggatgatccacaaattgtggtgtatactgcggttgataacccgaaagggatt
caattcggaggtgttgttgcagctccaattgtgcagaatattttggaggactcactacac
tatatgaaagtcccggaacgcagtgaccagcttccaaaaacgtataagtatggggaaact
ccgattgtgaccgtgcctgatcttacaggagcaacggtgcaggatatctatgaggattta
aatatgaattttaatctggcgcgttcaggctccggcaatacagtcatcaaccaagctccg
aaagctggggctagagtagaacagggctcaaccatcaggatttatatgggagcttctagt
gaataa
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