Paenibacillus sp. FSL R5-0345: R50345_23110
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Entry
R50345_23110 CDS
T03333
Name
(GenBank) stage V sporulation protein D
KO
K08724
penicillin-binding protein 2B
Organism
paef
Paenibacillus sp. FSL R5-0345
Pathway
paef00550
Peptidoglycan biosynthesis
paef01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paef00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R50345_23110
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paef01011
]
R50345_23110
Peptidoglycan biosynthesis and degradation proteins [BR:
paef01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
R50345_23110
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AIQ37261
LinkDB
All DBs
Position
complement(5064355..5066586)
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AA seq
743 aa
AA seq
DB search
MVKRIKLRTLFIGGCITLFFLVLIARVFWIQVVEGSDWQEKAATLWAHTSTIKAERGTIS
DRNGSVLASDVPAYTVVVNPAVIAEKGIGDEVVKGLHELLGKPEDELRKLIEAKDENGKY
LKNREVRNEGWKIDQELADKVKEFYVALGKEHKIQETGIGLVREQKRYYPKGSLAAHILG
YTDRDGKAIMGLEKSLDEQLKGSDGKLLYQSDGQGVKLPDSKDTYKPVVNGSNFKLTIDS
TIQKYIQEAMEKAYAQYKPKSMSVIAADPNTMEILGMANMPTFNPNEFWKTGAEGAGFYN
HAIKSTYEPGSTFKIVTLAAAVEEKLFDPVATFLSGSIRIKGYSKALHDINRSGWGQISF
LEGVKRSSNVLFVKLYEMLGQDRLLQYIDDFGFNEKTGIDLPGEAKGFVNPNLNRPIEIA
TLAYGHGVIGVTPLQQLVAVSAIANGGKLMTPYVVKEVTNPNTGDTKVTQPSVVRQVIDE
ASAKKTGEYLEQVVADQVKGTGRNAHIEGYRVAGKTGTAIKVEGKDYVKSKVLVSFIGYA
PVNDPKIAVIVIIDEPNVEVGGGKAAAPVFKEIVSQSLQYMGVPKLATETSDKDSKKTVK
TDAPALRTTPDLTGKTMKEARETLLDQGFDFEVVGEGASVETQYPEAGTKLVQGQRIYLL
SKQGDKPTIPKLQGESLRDALEVLTLLKVEIAVEGEGYVSEQIEGTKNGKTLVTLKMKPL
NDNSEDVPASSSADEGTESESGP
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagagaataaaacttcgcacgctgtttataggagggtgtattaccctctttttt
cttgttttgatagctagagtgttctggattcaagttgtggagggttcggattggcaagaa
aaggctgctacactttgggcgcatacctcgactatcaaagcagagcgagggacgatttct
gaccgtaatgggagtgtgctcgctagtgatgtccccgcttatactgtggttgtgaatccg
gcagtcattgctgaaaagggaatcggtgatgaggtcgtcaagggattgcatgagctactc
ggcaagccggaagatgagctacggaagctgatagaagctaaagacgagaacggcaaatac
ctcaagaaccgtgaagttcgtaacgaaggctggaagatcgatcaggaacttgctgataag
gtgaaagaattttatgtagccctaggtaaagaacataaaattcaagagactgggattggt
ctggttagagagcagaaacgatattaccctaagggttcgcttgctgcgcatattttaggg
tatacagatcgggatggcaaggcgattatgggtctggaaaaatccttagatgaacagctt
aagggttccgatggcaagctgctttatcaaagtgacggtcaaggggttaagctgccggat
tcgaaagatacctataaacccgtagtaaatggaagtaatttcaagcttacaatcgacagt
acgatccagaaatatatacaagaggctatggaaaaggcatatgcgcaatataagccgaaa
agtatgagtgtcattgccgctgatccgaatacaatggagattttggggatggcgaatatg
cctacctttaatccaaatgaattttggaaaacaggggctgaaggcgcaggtttctataat
catgctattaaatcaacttacgagcctggttcgaccttcaaaattgttacacttgctgca
gctgtagaagagaagctttttgatcctgtagctacatttttgtcaggatctatcagaatt
aagggatacagtaaggcattacatgatattaatcgttccggttggggacaaatcagtttc
ctcgaaggtgtgaagcggtctagtaacgtcctttttgtaaaactttatgaaatgctagga
caagacagacttttacagtatattgatgattttggcttcaatgagaagactggcattgac
ctgccaggagaagcaaaggggttcgtaaatccgaatcttaaccgacctattgaaattgct
acacttgcttatgggcacggagtaataggtgtcacgccgcttcaacagttggttgctgta
tctgccatcgctaatggagggaaactgatgactccgtatgtggtgaaagaggttacgaac
ccaaacaccggagacactaaggttactcagcctagtgtagtgcgtcaggtgattgatgag
gcaagcgccaagaaaaccggtgaatatttggagcaggttgttgccgaccaagtcaaagga
accggacgcaacgctcatattgaaggttaccgtgtggcagggaagacaggaacggctatc
aaggttgaaggtaaggattacgtgaagtccaaagtactggtttcctttattggttatgcg
cctgtgaatgatccaaaaatcgctgttattgttattattgatgaaccgaacgttgaggtt
ggcggtggtaaagctgcagctcctgtatttaaagaaatcgtatctcagtctctccaatac
atgggagttccaaagttggcaactgaaactagcgataaggatagtaaaaaaacagttaaa
acagatgcccctgcgctccggaccacacctgatctgacggggaaaacgatgaaggaagca
agagaaacgcttctggatcaaggctttgattttgaagtggtcggtgaaggagcttctgtt
gaaacccaatatccagaggctggaaccaagcttgttcaaggacagcgtatatatctatta
agcaagcaaggggacaagcctactattcctaagttacaaggagagtctctgcgtgatgca
cttgaggttcttaccctactaaaagtggagattgcggtagaaggcgaaggatatgtctcg
gaacagattgaaggaacaaagaacggcaagacattggtaaccttgaagatgaagccatta
aacgataatagtgaagatgttcctgcatcctcatctgctgatgagggtacagaatcggag
agcgggccatag
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