Paenibacillus sp. FSL R5-0345: R50345_23405
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Entry
R50345_23405 CDS
T03333
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
paef
Paenibacillus sp. FSL R5-0345
Brite
KEGG Orthology (KO) [BR:
paef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paef03400
]
R50345_23405
DNA repair and recombination proteins [BR:
paef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
R50345_23405
Archaeal homologous recombinant proteins
R50345_23405
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
MMR_HSR1
Baculo_PEP_C
DUF87
Motif
Other DBs
NCBI-ProteinID:
AIQ37319
LinkDB
All DBs
Position
complement(5127289..5130705)
Genome browser
AA seq
1138 aa
AA seq
DB search
MKPILLKVAGLQSYREMQEIDFESLCETGLFGIFGPTGSGKSSLLDAITLAMYGKVERAV
NGTQGIMNHSEDSLSVAFTFELTSSAGAHRYRVERKFKRTGEQTVSNTISRFIEITPDGD
NVMADKLADVTRCVEEHIGLKMDDFTRAVVLPQGKFAEFLSLRGVDRRQMLQRLFHLEQY
GDQLAIKLSRRVKENEAALRALIAEQQGLGSAGKGDVEAAAERLEQATLYAAECRRKLEA
ALQVSERFARIRELQEERTRRELQRQGLLAKEEEILLLEQKLGQADEAEARLPALKAWRS
AEEAFKSRLARAEGQEVLAAAAEQEAARAAAAAAAAQAALAAEEPALREGAGTYRRALEL
ESELGALRRELAALRERREEASRKLAELREGMARERELLAKGQKRQQELQQSLQPLGVRS
QERQSLQEAMQRLQGLHSAESQWDKAEKERLERAAALAAAQARLAEAEGRRESQEAARGQ
LIREAALHQEKLLATEEAARTAAERLEQDIGALEAAMKDQELHRLSLALAKELEEGQPCP
VCGSEHHPAPAFLQNSLEQQELEMKLQQVRALSRRALEARHLFRGLREQDQVWLEQVFGN
EVIEAANHPAAAGSEVRTAEVPPTDVSIPGEKELSELEATFLALKGQSGELRRTAVQWQQ
SMQEVQQLCLKEAAGVDGERSWVEGITAKAEELSAQLTTMRQNWAQQFPDLAPGEVEQAY
RELVAKDAQAEEIRSRLDISVKFLEEKSASVQSLQETITGLDKELAQWITQIEGKEQLQR
EKDQRLLEWTNGRAAAPLLAACEGRLQELLTALEASKQSHLTAAEKAQHEVKEAAISRQA
AESAREHYAAATSHWEQSLASSPFSSAAEVEGAALTPEEREIASSRVRAHRAEEAEVSLQ
LRNIEEKLDGASLSEEEWQVSQSTLRESKTEDEISLQARARAERDLEDLRHRHIRWMELE
AQRIDHASLQDQLSKLQTVLRGNAFVEYIAEEQLMQVCQSASQRLRFLSKQRYALEVDSG
GGFVIRDDGNGGVRRPVSTLSGGETFLTSLSLALALSAQIQLRGQYPLQFFFLDEGFGTL
DPELLDTVITSLERLHNDQLSVGIISHVPELRARLPRKLVVVPAEQGGGGSRILLEKM
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcctattctattaaaagtagcaggattacagagttatagagaaatgcaagaaata
gattttgaaagtctgtgtgagacggggctgttcgggatctttggaccaacaggtagcggt
aaatcaagtttgctagatgctattactttggcaatgtacggaaaagtggagcgcgctgtt
aatggaacacaggggattatgaatcactctgaggattcactcagcgtggcgtttaccttt
gagctcacttcttccgctggggcacatcgttatcgtgttgaacggaagttcaaacggaca
ggtgagcaaaccgtcagtaacacgattagccgtttcattgagattacacctgacggggat
aacgtcatggcggataagctcgcagatgttacgcgctgcgtggaggagcatatcggtcta
aaaatggatgatttcacgcgagcggttgtattgccgcaggggaaatttgccgaattttta
tcgcttcgtggcgtagatcgtcggcaaatgctgcagcgcctgttccatctggaacagtat
ggcgatcagcttgcaatcaagcttagccgacgggtgaaggagaatgaggcggcgctccgc
gcgctgattgctgagcaacagggtcttggcagcgcaggcaaaggggatgtagaggcagcg
gcggagcgcctcgagcaggccaccctttatgctgcggaatgccgtcgaaagctggaggcg
gcgctgcaggtctcggagcgtttcgcgcgtatacgcgagctccaagaggaacggacccgc
cgcgaattgcagcggcaggggctgctcgccaaggaggaggagattctcctccttgaacag
aagctcggccaagctgacgaggccgaggcaaggcttcccgcgctgaaagcatggcgcagc
gcggaagaagcctttaagagccgattggcccgcgcggagggccaagaggtgctggccgcc
gccgccgagcaggaggcggcgcgtgccgctgccgccgcggctgctgcgcaggccgcgctt
gcggcggaagagccggccctccgggagggggccggcacctaccgccgcgcgctcgagctc
gagtccgagctcggggcgctacggcgcgaactcgcggctctgcgtgagcgccgcgaagag
gcctcccgcaagctagcggagctgcgggagggcatggctcgggagcgtgagcttttagcc
aagggccaaaagcgccagcaagagcttcagcagagcttgcagccgctcggtgtccgctcc
caggagcggcagtctctgcaagaagcgatgcagagactgcaagggctgcactccgccgaa
tcccagtgggataaggcggagaaggagcgcctcgagcgtgccgctgccctggcggctgcg
caggcgcgactcgcggaggccgagggccgtcgcgagtcacaggaagctgctcgcgggcaa
ctgatccgcgaggcggcgctgcatcaagagaagctgctggcaacagaagaagctgcgcgc
accgcagcggagcgcctggagcaagatatcggtgcattggaagcagctatgaaggatcaa
gagcttcacagattgtcccttgcactagctaaggagctggaagaagggcaaccttgtcct
gtatgcggcagtgagcatcatcctgcacctgcattcttgcagaatagcttagagcaacag
gaactggaaatgaagcttcagcaagtccgggcgttatccagacgggcattagaagctcgt
catctgttccgcggtcttcgtgaacaggatcaggtatggctggagcaggtatttggaaat
gaagttattgaagcggcaaatcaccctgcagctgcaggttcagaagtccgtactgctgaa
gttcctccaaccgatgtgtctattcccggggaaaaagaattgtcagaacttgaagctaca
tttttggcattaaagggtcagtccggtgaactgcgccgaactgcggtacaatggcagcaa
tcaatgcaggaggttcagcagctgtgcctcaaagaagcagcaggtgtcgatggtgaacgt
agctgggtggaaggaattactgccaaagctgaggaactcagcgcgcagctaacgacgatg
cggcagaactgggcacagcaattcccggatttggcaccaggtgaagtagaacaagcatat
cgtgagctggttgcgaaggatgcacaagctgaagaaattagatcgcgtcttgatatcagc
gtcaagtttctggaagagaagagcgcttcagtgcagagccttcaagagaccataacaggg
ttggacaaagagctggcccagtggatcacacagatcgaagggaaggaacaattgcaacgt
gaaaaagatcagcgtctactggagtggacgaatggtcgcgcggcagctcctcttctagcg
gcgtgtgaaggacgtctgcaggaattgttaacggctctggaggcaagtaagcaatcacat
ctcacagcggcggagaaggctcagcatgaggttaaggaagctgcgatttctcgccaggct
gcagaatctgcgcgtgaacattacgcagcagctaccagtcattgggaacaaagcttggca
tcttcaccgtttagttcagctgctgaggttgaaggagcagcgctcacacccgaagaacgg
gaaatcgcttcttccagggtacgtgctcatcgtgccgaagaagctgaggtctccttgcag
ctgcgtaacattgaagagaagcttgacggggccagcttaagtgaagaggaatggcaagta
agccagagcaccttgagagaaagcaagactgaggatgaaatatctctacaggctagagcg
cgtgcagagcgtgatctggaggatttgcggcatcggcatattcgctggatggagcttgaa
gctcagcggattgatcacgcttctttgcaagatcagctatccaaactgcagactgtctta
cgtgggaatgcctttgttgagtacattgcggaggagcagttgatgcaggtgtgtcagtcc
gcttctcagcggcttcgtttcctgagcaaacagcgttatgcgctggaggttgattcgggt
ggcggctttgtaatccgagatgatgggaacggcggggtgagaagacctgtctcaactctg
tctggtggagagaccttcctcacatccctttccctggcacttgctctttcagctcagatc
cagctccggggacaatatccgttgcagtttttctttctggatgaagggtttggtacgctc
gatccagaactgctggatacagtgattacttcacttgaaagattgcataacgatcagctg
tcggttggtattatcagccacgttccagagcttcgtgcaagattgccgcgtaagctggta
gtagttcctgctgaacagggcggaggaggatctcgtatccttttggaaaaaatgtga
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