Paenibacillus sp. FSL R5-0345: R50345_23420
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Entry
R50345_23420 CDS
T03333
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
paef
Paenibacillus sp. FSL R5-0345
Brite
KEGG Orthology (KO) [BR:
paef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paef03400
]
R50345_23420
Enzymes [BR:
paef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R50345_23420
DNA repair and recombination proteins [BR:
paef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
R50345_23420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
VapB_antitoxin
Motif
Other DBs
NCBI-ProteinID:
AIQ37322
LinkDB
All DBs
Position
complement(5136059..5139571)
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AA seq
1170 aa
AA seq
DB search
MSVTFLLGRSGSGKTTKIWESISSSLEKEPLGAPIIILVPEQGSFGAERGLLTVGNVKGS
IRAQTLSFSRLAYRVKQETGGSASLPISEEGKKMLIYKIIRRRKEELKLFGASADRPGFV
ERLNQLHTEMKRCCLASTDLEEQLSAMRGAIARSPILEGKLDDLQVVFSDLEKEMSRLYI
DEEDRLAELAEHIPDSSYIRGAEIWVDGFHGFTPQEFVVLRELMQQASKLTVSLTLDRSY
PYGDQLNELELFHPTAVTYIKLRGIAEELGMDVWDELLEPAVLPRFEESPALAHLERGYD
RRKVWFGADELANEAISIGAAVSHRAEVEGALREMIRLARDEGAKYGEMAVLMRNIGDYE
QLIKPLFQDYGVPFFLDQKVNELHHPLVEFVRSALDVVRRRWRFEDVFRCVKTELLLPLD
GSITREDMDDLENYVLACGIQGYRWTDGRSWKGIPSLSLEGGRQMDEELLATMERCRASI
TGPLFAFEKRIQKSRSGLELCTAVYKLLDETDVARKLEKLSVDSMEKGQPEKAREHSQLW
GAVLDLLDQIVEMMGNERLEFDVFTGVLETGLAELKMGLVPPALDQVLVGNMDRTRPTGV
KYAFLLGFNEGVVPAQFKEDGILSEGERSVLENAGMELAPGASRKLLDERFLIYNALTTG
SRKLWISYATADDEGKALLPSEVIRHLHRMFPRVHEHILSTLPSAGLPDEVRDSIHLGYI
GHPEQSLRALIMQLRQWRQGTEIPVLWWDVYNWFASDEKRSLELKRLLSSLFYRNEGTKL
KRGTSLRLYGGSTLRGSVSRMEKFVACSFSHFASYGLRLKERQLYKLQAPDIGQLFHAAL
SDMAVRLKEEGRGWGSLSPEECRREASETVERLSPMLQGEILMSSKRYGYISRKLKNIVG
RASVILGEHARRGSFEPVGLELDFGPDKELPPLRITLPNGCVMEVVGRIDRVDMARGENG
ILLRVIDYKSSQKDLKLHEVYYGLSLQMLTYLDVLLTYSEQWLGQPALPAGTLYFHVHDP
LLTSSNGMNKEQAEQELLKRFKMKGLLTADREVVSLMDTTLDKGYSSIVPVAVKADGSFY
SSASVATPEQWGHLLSSVRGTISDIGTRITEGDVAIEPYRIGQETACTFCSFRPVCQFDE
AVEGNGYNNLGKPGKDVIWDLLSRKGGTTP
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtaacctttttactaggccgctcaggcagtggcaagacaacaaaaatatgggag
tctatctcttcttcattagagaaggagcctcttggcgcaccgatcattattctagtacca
gagcaaggttcctttggagcagaacgggggcttctcaccgtagggaatgtgaaggggagc
attcgggcgcagacactaagcttttctcggcttgcctatcgggtgaaacaggaaactggg
ggtagcgctagcctgcctatcagtgaagaaggcaaaaagatgttaatttataaaattatc
cgccgtcgcaaagaggaactgaaattgttcggtgcctcagcagacagaccgggttttgtg
gaacggctgaatcaactgcatacggagatgaagcgttgttgcttggcttccactgattta
gaggaacagttgtctgcaatgcgaggcgctattgcaagaagccctattcttgaaggaaag
ctggatgatttacaggtggtattcagcgatttagagaaggagatgtcgcgtctctacatc
gatgaagaggatcgtttagcggaactagctgagcatattcctgattcctcctacattcgt
ggagcggagatttgggtagatgggttccatggctttaccccacaggaattcgtagtgctt
agagaattaatgcagcaagcatcgaagttgaccgtctcacttacacttgatcgctcctat
ccctatggagatcagttgaatgagcttgaattatttcacccaactgcggttacttacatt
aaactgcgtggaatagctgaagagctgggcatggatgtgtgggacgagcttttggagcca
gcggttcttccgcgttttgaagaaagtcctgctcttgctcatctcgaaaggggatatgac
cgtcgaaaggtctggtttggtgcagatgaactggcaaatgaagcaatatctataggtgca
gcagtttctcacagagcagaggttgagggagcgctgcgtgaaatgatcaggctggcacga
gatgaaggtgcaaaatatggtgaaatggccgtattaatgcgtaatattggagattacgaa
cagctgattaaaccgttgttccaagattatggagtgccattttttctggaccagaaggta
aatgagctgcatcatccattggtagagtttgtacgttccgcattggatgtagtgcgtcga
cgctggcgcttcgaggatgttttccgctgcgtaaagacagagcttttgctgccgctggac
gggagtattacgcgtgaggatatggatgatttagagaattatgtgctggcttgtgggatt
caagggtatcgctggacggatggccgttcttggaaaggaattcctagcttgtcgctggaa
ggcggcagacagatggatgaagaactgcttgctacgatggaacgatgccgtgccagtata
acgggtcctctatttgcttttgagaaacggatacagaagagtagaagcggtcttgaactt
tgtaccgccgtgtacaagctgctggatgagacggatgttgctcgaaagctggagaaactt
agtgttgattctatggagaaggggcaacccgagaaggctagagaacatagtcagctgtgg
ggtgcagtgcttgatctgcttgatcagatcgttgaaatgatgggcaacgaaagacttgaa
tttgatgtgttcaccggagtcctagagacaggacttgctgagcttaagatgggacttgtt
cctcccgcgctcgatcaagtactggttggtaacatggatcggactcgaccaacgggagtt
aaatacgcttttttgcttggatttaatgaaggtgttgtgcctgcgcagtttaaggaagat
ggaattctctcggaaggcgaacgctctgtgcttgagaacgccggtatggagcttgctcct
ggtgcttctcgtaagctgctggacgagcggtttttgatctataatgcgctaacgacagga
agtcgaaagctctggattagctacgccactgctgatgatgagggcaaggcgcttcttccc
tctgaggtaatccgtcatttgcatagaatgttcccaagggttcatgagcacatcctatcc
acacttccctctgcgggactaccagatgaagtcagagattccattcacctgggttacatt
ggtcatccagaacagagtcttcgtgcattgattatgcagctacgccagtggcgtcaaggg
accgagatacctgtattgtggtgggatgtttataattggtttgcgtctgatgagaaacga
agcctcgaactgaaacgtctgctcagttcattgttttatcgtaatgagggaacgaagcta
aagcgaggtactagcctgcgattgtatgggggatcgacactgcgtggcagtgtgtcccgg
atggagaagtttgttgcttgctccttctcccattttgcatcctatggacttagattgaag
gaacgccagctatataagctgcaagcacctgatattggacaactgttccatgctgcgtta
agtgacatggcggtaagactgaaagaagagggccgcggctggggaagcttgtctccagag
gaatgtcggcgtgaggcaagtgaaacggtagaacgtttatcgccgatgctacagggtgaa
attctgatgagctctaaacgttacggatacatttcccgcaagctaaaaaacattgttgga
cgtgcttctgtgattctgggcgagcatgcccgccgaggtagctttgagccggtagggctg
gagctggattttggaccggataaggagttgcctcctttaagaattacgctgccgaatggc
tgtgtgatggaggttgttggacggattgaccgtgtagacatggcccgtggagagaatgga
attcttctgcgagtaattgattataaatcgtctcaaaaagatctcaaactgcatgaagtg
tactatggattatcgctacagatgctgacctatctggatgtgctgcttacgtactcggag
caatggctcgggcaaccggcgcttccagcagggacactgtattttcacgtacatgaccca
ctgttaacctcatctaacgggatgaacaaggaacaggcagaacaagaattgctgaaacgc
ttcaagatgaaaggactgcttacagcagaccgcgaggtcgtatccttgatggatacgact
ttagacaaagggtattcttctatcgtgcctgtagcagtaaaagctgatggcagtttttat
agtagtgcttctgtagctacaccagagcaatgggggcacttattatcatccgttcgggga
acgatctcggatatcgggacacgcattacggaaggtgatgtggcgattgagccataccgg
attgggcaggagacagcctgcacattctgttcctttagacccgtctgccagttcgatgaa
gccgtggaaggtaatggctacaacaatctgggtaagccagggaaggacgttatttgggat
ctgctgtcccgcaaaggaggaactacaccgtga
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