Paenibacillus sp. FSL R5-0345: R50345_24340
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Entry
R50345_24340 CDS
T03333
Name
(GenBank) HemD protein
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
paef
Paenibacillus sp. FSL R5-0345
Pathway
paef00860
Porphyrin metabolism
paef01100
Metabolic pathways
paef01110
Biosynthesis of secondary metabolites
paef01120
Microbial metabolism in diverse environments
paef01240
Biosynthesis of cofactors
Module
paef_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
paef00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
R50345_24340
Enzymes [BR:
paef01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
R50345_24340
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
R50345_24340
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
Radical_SAM
DAHP_snth_FXD
DUF834
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
AIQ37482
LinkDB
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Position
complement(5346919..5348472)
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AA seq
517 aa
AA seq
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MTGKVYLVGAGPGDAKLITVKGLECIRKSDVLVYDRLASPRLLKCMKPGGEKIYVGKLPD
RHTMKQEEINQLLVDLALQGKTVVRLKGGDPTIFGRVGEEAELLRKNGIYYEIVPGITSA
ISVPAYAGIPVTHRDHASSLSIITGHESPDKLDHSIHWDKVTNATGTLVFLMGVAKIGYI
SAQLIKHGRPPETPVALVRWGTRADQETLTGTLADIEAKVKAADFQPPAVIVVGDVVLQR
EQLKWVEAMPLFGKRIVVTRARSQASELVDMIEELGGEPYEFPVIETIMPEGAEKKEKIA
AAFGALESYDWVFFTSPNGVEFFWRHLAEQGADIRGLHRARIAAVGPGTAAALAQRGVIA
EELPAKFQAEGLIETFGPRLLPGQNVLLPRGDLAREWLPDKLRELGLQVTDVDTYETVVT
GEDDDELLKLLEEGRVHAVTFTSSSTVRNFIHILKRMGLEDPLPLLANVKIACIGPLTEQ
TAVEAGLTPGLLPEEATINALVQELCRWNAETQLQKA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
ttgacggggaaggtttatttggtaggtgcaggtcccggggacgcaaaactgattactgta
aaaggcctcgagtgtattcgaaaaagcgacgtactggtgtacgatcggctggcaagtcct
agattgctgaaatgcatgaagcctggcggtgagaagatttatgtaggcaagctgccggat
cgccacacgatgaagcaggaagagattaatcaattgttagttgatttggctttgcagggg
aaaacagtggtgcggcttaagggtggggaccctacgatttttggccgcgtaggtgaagaa
gcggagctgctgcgcaaaaatgggatctattacgaaatcgtaccgggcatcacgtcggcg
atcagcgtacctgcttatgcgggtatacctgtcacgcaccgcgatcatgcttcttccctg
tcgattatcaccggacatgagagtccagataaactggatcattccattcattgggataaa
gtaacgaacgccacagggacgttagtattcttgatgggcgtagctaaaataggatatatc
agcgcccagctaatcaagcatgggcgtccgccagaaacacccgtggcgctggtacgctgg
ggcacacgcgcagatcaggagacactgacgggaaccctcgccgatattgaggcgaaggtg
aaggcggcggattttcagccgccagccgtgatcgttgtcggcgacgtggtgctgcaacgc
gagcagctcaagtgggttgaggcgatgccgttattcggcaaacgcatcgtagtgacacgg
gctcgcagccaagcaagcgagctcgtggatatgattgaggaactcggcggggaaccctac
gagttcccggtgatcgagacgattatgccggaaggcgcagagaagaaggagaagattgca
gcggcgtttggcgcgctggaatcgtacgactgggtattcttcactagcccgaacggtgtg
gagtttttttggcgccacttggcggagcagggggcggacattcgggggcttcaccgcgca
aggattgcagcggtggggccgggcactgctgccgcgctggcgcagcgcggggtgattgct
gaagaacttccggcgaagtttcaggcggaaggtctgattgagacgttcggccctcggctg
ctgccggggcagaacgtgctgttgccgcgcggtgatctggcgcgcgaatggctgccggac
aagctgagagagcttggccttcaagtgacagacgtcgatacctatgagacggttgtaacg
ggtgaggatgatgatgagctgttgaagctgctggaggaggggcgtgttcacgcagtaacc
tttaccagctcttcgacggtgcgcaatttcatccacattctgaagcgaatggggctggaa
gatccactcccactgctagctaatgtgaaaatagcctgtattggtccattaaccgagcag
acagccgtggaggcgggtcttactccgggactacttcctgaagaagctactattaatgct
ctggtgcaggagctctgtcgctggaatgcagagactcaacttcaaaaagcttga
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