Paenibacillus sp. FSL R5-0345: R50345_28140
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Entry
R50345_28140 CDS
T03333
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
paef
Paenibacillus sp. FSL R5-0345
Pathway
paef03420
Nucleotide excision repair
paef03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R50345_28140
03430 Mismatch repair
R50345_28140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paef03400
]
R50345_28140
Enzymes [BR:
paef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R50345_28140
DNA repair and recombination proteins [BR:
paef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R50345_28140
MMR (mismatch excision repair)
Other MMR factors
R50345_28140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Terminase_6N
ResIII
GBS_Bsp-like
DEAD
Motif
Other DBs
NCBI-ProteinID:
AIQ38131
LinkDB
All DBs
Position
complement(6171529..6173868)
Genome browser
AA seq
779 aa
AA seq
DB search
MQLISIQDAVSRLNPPQRQAVETTEGPLLIMAGAGSGKTRVLTHRIAWLIANRKAPPWAI
LAITFTNKAAREMQERVSKLVGPEGRDIWVSTFHSMCVRILRKDIERIGFTSNFSILDST
DQLSVIRNCMKELNIDTKKFEPKAVQAIISASKNELITPAQYEQKVGDYFEGLVAKVYKM
YQRRLRSNNSLDFDDLIMKTIELFKEVPEVLDFYQKKFKYIHVDEYQDTNRAQYMLCRML
ADSHHRICVVGDSDQSIYRWRGADITNILNFEEDYPEAKTILLEQNYRSTANILNAANGV
IALNSGRKPKKLWTDSEEGAKIKVYRADSEHDEGYFVTGEISKNVKQGQAYQNHAILYRT
NAQSRVIEEILIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLLSNPDDDISLTRIINVPKR
GLGDTTVGKLAAAAAERGVSIFRVLQTVDDLGFAGRTRNMLVEFYDMIEALHRMVEFLSV
TELTEKILEMSQYRLELQNENTLESRSRLENIDEFLSVTMEFEKNNEDKSLVSFLTDLAL
IADIDSVNDDEEDRSDAVVLMTMHSAKGLEFPTVFIVGMEEGVFPHSRAFQDNDELEEER
RLAYVGITRAEKQLFLSCARMRTLFGRTTANQPSRFIEEIPEELKEDTAKTQDRFQRGGS
EVGGAYGGRGFSGGSRGNFGGRSGAAGAAPIGSGGTASAATSKSSVTVTSGGAQRATGSG
AAAAGEYKAGDKVSHGKWGTGTVVAVKGTGNDTELQIAFPAPVGVKRLLAGFAPITRVE
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttattagcatacaagacgcagtaagtcgactgaatcctccacaaagacaggct
gtcgaaactactgaaggaccacttttgattatggctggtgcgggcagtgggaagacgaga
gtgttgactcacagaattgcctggctgattgccaatcgaaaggcgccgccttgggcgatt
ttggcgattacgtttacgaataaagctgcgcgggaaatgcaggaacgtgtatctaagctt
gtcggacctgagggaagagatatctgggtatccacctttcactctatgtgtgttcggatt
ttgcggaaggatatcgagcggattggttttacctccaacttctccattctggactctaca
gatcagctatccgtaatacgtaactgtatgaaggaactgaatattgatacgaagaaattc
gaaccaaaagctgtgcaggccatcattagcgcatcgaagaatgagctgatcactccggcg
cagtatgagcagaaggttggcgattattttgaaggcttagttgcaaaggtatataagatg
tatcaaaggcgtctaagaagcaataactcgcttgattttgatgatttaattatgaagacc
attgaactgtttaaggaagttcccgaggtccttgatttctaccaaaagaaattcaaatac
atccacgtggatgagtatcaggatacgaacagagcacagtatatgttgtgccgtatgctc
gctgacagccaccaccggatttgtgtggtaggggatagtgatcagtcgatttatcgctgg
cgcggagcggatattacaaacattcttaattttgaagaggactatccagaagcgaagacc
attcttcttgagcagaactaccgttcaactgctaatatcctgaatgcagccaatggtgtg
atcgcactcaatagtggacgtaagccgaagaagctgtggaccgattccgaggaaggcgcc
aagattaaggtgtaccgggcggactccgagcatgatgaaggttactttgtaaccggagaa
atcagcaaaaatgtgaaacagggtcaggcctatcagaatcatgcgatactgtatcgtaca
aatgcccagtcacgggtaatcgaggaaattctaattaaatctgatattccatatcaaatc
gtaggcgggattaagttctatgatcgtaaagaaatcaaggatctgctcgcttatttacgc
ctgctgtcaaatcctgatgatgatatcagcctgacgcgtattattaatgtacctaagcgg
ggattaggggatacaacggttggcaagctggcagctgcggctgctgagcgtggtgtttct
attttccgcgtactgcaaactgtagatgatttgggctttgctgggcggacgcggaatatg
ctagtagagttctacgatatgattgaagctctgcatcgtatggtggagttcttgtccgta
accgaactgacggaaaaaatactagagatgtcgcagtatcgtttggagctgcaaaatgaa
aacacactcgaatctcgctcgcgactagagaacatcgatgagttcctgtcggtgacgatg
gagtttgaaaagaataacgaggacaagtcgcttgtctccttcctcacggatctcgcgctt
atcgcagatattgatagtgtaaatgatgatgaagaggaccgtagtgacgctgtagtcctg
atgacgatgcacagcgccaaaggtctggagttcccaacggtgtttattgtcgggatggaa
gaaggcgtgttcccgcacagccgtgctttccaagataacgacgagcttgaagaggaacgc
cgccttgcgtatgtaggaatcacccgcgccgagaaacaattgtttctctcttgcgcgcgg
atgcgtacgctctttgggcggacgacggcgaatcagccgtcccgcttcattgaagagatt
ccagaggaactgaaggaagataccgctaagacgcaggaccgtttccaacgtggaggctcg
gaggtaggcggtgcttacggtggacgcggcttcagtggcggcagtcgtgggaacttcggc
ggccgaagtggagccgctggtgcggcaccgattggcagcggaggcacagcgtccgcagcg
acaagcaaaagcagcgtgaccgtaacctcaggaggcgctcagcgcgctactggatcaggt
gctgcagcagctggcgaatacaaagcgggtgataaggtttcgcacggcaaatggggcacc
ggtaccgttgtggctgttaagggcaccgggaatgacacggagctgcagattgctttcccg
gcaccagtgggtgtaaaacgactgcttgcagggtttgcaccgattaccagggtggaataa
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