Pseudomonas aeruginosa YL84: AI22_05445
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Entry
AI22_05445 CDS
T03035
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
paeg
Pseudomonas aeruginosa YL84
Pathway
paeg00300
Lysine biosynthesis
paeg00470
D-Amino acid metabolism
paeg01100
Metabolic pathways
paeg01110
Biosynthesis of secondary metabolites
paeg01120
Microbial metabolism in diverse environments
paeg01230
Biosynthesis of amino acids
Module
paeg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
paeg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AI22_05445 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AI22_05445 (dapF)
Enzymes [BR:
paeg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AI22_05445 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AHH48322
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All DBs
Position
complement(1159413..1160243)
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHVQPKHVKLWGDRNTGIGFDQLLIVEAPSSPDVDF
RYRIFNADGSEVEQCGNGARCFARFVQDKRLTVKKSIRVETKGGIIELNIRPDGQVTVDM
GPPRLAPAEIPFQAEREALSYEIEVNGQRVELAAVSMGNPHGVLRVENVDSAPVHSLGPQ
LEVHPRFPKKANIGFLQVLDPHHARLRVWERGVGETQACGTGACAAAVAGIRQGWLQSPV
QIDLPGGRLHIEWAGPGQPVMMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgcgcttcaccaagatgcatggcctgggcaacgacttcatggtcctcgacctg
gtcagccagcacgcccatgtgcagcccaagcacgtcaagctctggggcgaccgcaacacc
ggaatcggcttcgaccagttgctgatcgtcgaagccccgagcagccccgacgtcgacttc
cgctaccggatcttcaacgccgacggctccgaggtcgagcagtgcggcaacggcgctcgc
tgcttcgcccgcttcgttcaggacaagcgcctgacggtgaagaagagcatccgcgtagaa
accaagggcggcatcatcgagctgaatatccgcccggacggccaggtcacggtggacatg
ggtccgccgcgcctggccccggccgagataccgttccaggccgagcgcgaagccttgtcc
tatgagatagaggtgaatggccagcgcgtcgaactggccgcggtatccatgggcaatccc
catggcgtgctgcgcgtcgagaacgtcgacagcgcaccggtacacagcctcggtccgcaa
ctggaagtccatccgcgcttcccgaagaaggccaacatcggcttcctccaggtgctcgat
ccgcaccatgcgcgcctgcgcgtctgggagcgcggcgtcggcgagacccaggcctgcggc
accggcgcctgcgccgcggcggttgccgggattcgccagggctggctgcaatcgccggtg
cagatcgacctccccggcggccgcctgcacatcgagtgggcaggtcccggccagcccgtt
atgatgaccgggcctgccgtccgcgtgtatgaaggccaggtccgcctgtaa
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