KEGG   Pseudomonas aeruginosa YL84: AI22_14830
Entry
AI22_14830        CDS       T03035                                 
Name
(GenBank) RNA polymerase sigma 70
  KO
K02405  RNA polymerase sigma factor FliA
Organism
paeg  Pseudomonas aeruginosa YL84
Pathway
paeg02020  Two-component system
paeg02025  Biofilm formation - Pseudomonas aeruginosa
paeg02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:paeg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AI22_14830
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    AI22_14830
  09142 Cell motility
   02040 Flagellar assembly
    AI22_14830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:paeg03021]
    AI22_14830
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:paeg02035]
    AI22_14830
Transcription machinery [BR:paeg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AI22_14830
Bacterial motility proteins [BR:paeg02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    AI22_14830
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_30 UPF0122 GerE MarR_2 Rv2175c_wHTH
Other DBs
NCBI-ProteinID: AHH50131
LinkDB
Position
3177275..3178018
AA seq 247 aa
MTAASGVRMYSKAQAQNSQEQLIQRYAPLVKRIAYHLLGRLPASVQVEDLMQAGMIGLLE
AAKKYDAGKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVTDAIRAIEARTGRD
AKDHEVAAELQLSLEDYYGILSDTQGSRLYSFDDLLQDGEHGLPEDTSLSHNEPIHGLLD
ERFQAALADAIAKLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRAR
LADWRSA
NT seq 744 nt   +upstreamnt  +downstreamnt
atgacagcggcctctggagtgcgtatgtatagcaaggcgcaagcgcagaactcccaggag
caactgatccagcgttacgcaccactggtcaagcgcatcgcctatcacctgctcggccgc
ctgccggccagcgtgcaggtggaggacctgatgcaggccggcatgatcggcctgctcgag
gccgcgaagaaatacgacgccggcaagggcgccagcttcgagacctatgccggcatccgc
atccgtggggccatgctcgacgaggtccgcaagggcgactgggcgccgcgttcggtgcac
cgcaacacgcgcatggtgaccgacgcgatccgcgcgatcgaggcgagaaccggacgcgac
gctaaagatcacgaagttgctgccgaactccaattgagcctcgaagattactacggcatc
ctcagcgacacgcagggcagccgcctgtacagcttcgacgacctgttgcaggacggcgaa
catggattgccggaagacaccagcctcagtcacaacgaaccgatccacggcctgctcgac
gaacgtttccaggcggccctggcggatgccatcgccaagttgccggagcgcgagcgcctg
gtgctggcgttgtattacgacgaggaactcaacctcaaggagatcggcgaggtactgggc
gtcagcgaatcgcgggtcagccagttgcacagccagtgcgccgcgcgtttgcgcgcgcgc
ctggccgattggcggtcggcctga

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