KEGG   Pseudomonas aeruginosa YL84: AI22_18345
Entry
AI22_18345        CDS       T03035                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
paeg  Pseudomonas aeruginosa YL84
Pathway
paeg02020  Two-component system
Brite
KEGG Orthology (KO) [BR:paeg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AI22_18345
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:paeg03021]
    AI22_18345
Transcription machinery [BR:paeg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AI22_18345
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Rv2175c_wHTH HTH_31 Sigma70_ECF
Other DBs
NCBI-ProteinID: AHH50812
LinkDB
Position
3924463..3924969
AA seq 168 aa
MGMDQTRNRLVGLMFQNDYSWLSGRLRRYLGCPHSAEDIASETFLKVLALPDPASIREPR
ALLTTIARRLMYDGWRRQDLERAYLESLAGLPEALAPSAEEQAQVVETLLRLERMLAGLS
PKARAAFIHSQIGGLTYVEIAGLLEVSVSRIHQYMVEGFKQCYQVLAE
NT seq 507 nt   +upstreamnt  +downstreamnt
atgggcatggatcagacacgcaatcgcctcgtcggcctgatgttccagaacgactattcc
tggctgagcgggcgcctgcggcgctacctcggctgcccccacagcgccgaggacatcgcc
tcggaaaccttcctcaaggtccttgccctgccggacccggcaagcatccgcgagccgcgc
gcgctgctcaccaccatcgcccgccggctgatgtacgacggctggcggcgccaggacctg
gaacgcgcctacctggaaagcctggccgggcttccggaggccctcgcgccgtccgccgag
gagcaggcccaggtggtggaaaccctgctgcgcctggagcgcatgctcgccgggctgtcg
ccgaaggcccgcgccgccttcatccatagccagatcggcggactgacctacgtggagatc
gccggcttgctggaggtttccgtcagccgcatccaccagtacatggtcgagggcttcaag
cagtgctaccaggtgcttgccgaatga

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