KEGG   Pseudomonas aeruginosa YL84: AI22_20030
Entry
AI22_20030        CDS       T03035                                 
Name
(GenBank) Fis family transcriptional regulator
  KO
K11917  sigma-54 dependent transcriptional regulator
Organism
paeg  Pseudomonas aeruginosa YL84
Brite
KEGG Orthology (KO) [BR:paeg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:paeg03000]
    AI22_20030
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:paeg02044]
    AI22_20030
Transcription factors [BR:paeg03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    AI22_20030
Secretion system [BR:paeg02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   AI22_20030
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 AAA_5 Mg_chelatase HTH_30 AAA_16 AAA_2 AAA HTH_8 bpMoxR FixP_N AAA_19 AAA_3 Sigma70_r4
Other DBs
NCBI-ProteinID: AHH51143
LinkDB
Position
complement(4315182..4316267)
AA seq 361 aa
MSVITHPHARELTKSVRATVLVFNDPRSRELLERIERLAPSEANALVIGETGTGKELVAR
HIHALSGRNGGPFVAVNCGAFAESLVESELFGHEKGAFTGALQSKAGWFEAANGGTLFLD
EIGDLPPSIQVKLLRVLQEREVVRLGSRRPIPIDVRLVAATNVDLADAVVAGHFREDLFY
RLHVATIQLPPLRERRGDILPLAEYFIVEHCRRLGYTSASLSPEAERKLLGHSWAGNIRE
LENAIHHALLVCRNRLIQPADLHLIDMRARQEPNGLRRAPESAAGSALEAALQALFEENR
EDLYEHIEETVFRAAYRFCHGNQLQTGRLLGISRNIVRARLEKIGELETSPRHNVVSLVG
K
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgtccgtcatcacccatccccacgcccgcgagctgaccaaatcggtgcgcgccaccgtg
ctggtgttcaacgatccccgatcccgcgagctgctggagcgcatcgagcgcctggcgccc
agcgaggccaacgcgctggtcatcggcgagaccggcaccggcaaggagctggtggcgcgc
catatccacgccctcagcggacgcaacggcggcccgttcgtcgcggtcaactgcggtgcc
ttcgccgagagcctggtggagagcgagctgttcggccacgagaagggcgcctttaccggt
gcgttgcagagcaaggccggctggttcgaggcggccaacggcggcaccttgttcctcgac
gagatcggcgacctgccgccgagcatccaggtcaagctgctgcgcgtgctgcaggagcgc
gaggtggtgcggctcggttcgcgccggccgatccccatcgacgtgcggctggtggcggcg
accaacgttgacctggccgacgcggtggtcgccgggcacttccgcgaggacctgttctac
cgcctgcacgtggcgaccatccaactgccgccgttgcgcgagcgccgcggcgatatcctg
ccgctggccgagtacttcatcgtcgagcactgccggcgcctcggctacaccagcgcgagc
ctgagcccggaagccgagcgcaagctgctcgggcattcctgggcgggcaatatccgcgag
ctggagaacgccatccaccacgcgctgctggtctgccgcaaccgtctgatccagccggcc
gacctgcacctcatcgacatgcgtgcgcgccaggagccgaacggcttgcgccgcgctccc
gaaagcgccgccggctcggcgttggaggcggcgctgcaggcgctgttcgaggaaaaccgc
gaggatctctacgagcacatcgaggaaaccgtgttccgtgccgcctatcgcttctgccac
ggcaaccagttgcagaccggacgcctgctggggatcagccgcaacatcgtgcgcgcccgc
ctggagaagatcggcgagctggaaacctcgccacggcacaacgtggtctcgctggtgggc
aagtga

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