Pseudomonas aeruginosa YL84: AI22_22765
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Entry
AI22_22765 CDS
T03035
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
paeg
Pseudomonas aeruginosa YL84
Brite
KEGG Orthology (KO) [BR:
paeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paeg03016
]
AI22_22765
Enzymes [BR:
paeg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AI22_22765
Transfer RNA biogenesis [BR:
paeg03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AI22_22765
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AHH51669
LinkDB
All DBs
Position
4932614..4933162
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AA seq
182 aa
AA seq
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MPDRSLRLFFALPCPPPLAERIGRWRDGRPLPGRQVATANLHLTLAFLGQVPSARLEALL
DMAAAIEAAPFDLCLDRLLRWRNGILLLAPSQPPGALLRLRRALRSGLAELELPVETRPF
SAHLTLARDVAPLEDAPLPPTFVWQVDHFSLFCSQNDAAGVRYRTLGRWALCGEDSNERF
AP
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatcgctctcttcgcctgttcttcgccctgccctgcccacctcccctcgccgag
cggatcggccggtggcgcgatggccggccactgcccggacgccaggtggcgacggcgaac
ctgcacctgaccctggccttcctcgggcaggtcccgtccgctcggctcgaggccctgctg
gacatggccgcggccatcgaagccgcgcccttcgacctgtgtctcgaccgtctgctgcgc
tggaggaacggcatcctgctgctggcccccagccaaccgcccggcgccctcctgcgcctg
cgccgcgccctgcgctccggccttgccgaactggagctgcctgtggaaacccgcccattc
agcgcccatctgaccctggctcgcgatgtcgcgccgttggaggacgccccgctaccccca
accttcgtatggcaggtcgaccatttcagcctgttttgctcgcaaaacgacgccgcgggc
gtgcgctaccgcacactcggtcgctgggcgttgtgcggggaagattcaaacgagcgtttc
gcgccgtaa
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