Pseudomonas aeruginosa YL84: AI22_24210
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Entry
AI22_24210 CDS
T03035
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
paeg
Pseudomonas aeruginosa YL84
Pathway
paeg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
paeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AI22_24210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paeg03400
]
AI22_24210
DNA repair and recombination proteins [BR:
paeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AI22_24210
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AI22_24210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHH51946
LinkDB
All DBs
Position
complement(5239611..5241623)
Genome browser
AA seq
670 aa
AA seq
DB search
MDTFQLDSRFKPAGDQPEAIRQMVEGLEAGLSHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKTFFPHNSVEYFVSYYDYYQPEAYVPSSDTYIEKDSSINDHIEQ
MRLSATKALLERPDAIIVATVSSIYGLGDPASYLKMVLHLDRGDRIDQRELLRRLTSLQY
TRNDMDFARATFRVRGDVIDIFPAESDLEAIRVELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLEAVDQIKAELKERLDYLRNNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRAPGEPPPTLYDYLPANSLLVIDESHVSVPQVGAMFKGDRSRKETL
VEYGFRLPSALDNRPLRFEEWEAVSPQTIFVSATPGPYEAEHAGRVIEQVVRPTGLVDPE
IEVRPAMTQVDDLLSQIRQRVAKDERVLVTTLTKRMAEDLTDYLGDHDVRVRYLHSDIDT
VERVEIIRDLRAGAFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLHGKAILYADNVTGSMQRAIDETERRRAKQIAFNEAHGIVPKGVRKDIKDILEGAVV
PGARGKRKGVAKVAEESGRYENELRSPSEISKRIRQLEEKMYQLARDLEFEAAAQLRDEI
QTLRERLVNV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggatacgttccaactcgactcgcgcttcaagcccgccggcgaccagccggaagccatc
cggcagatggtcgaggggctggaggcggggctttcgcaccagaccctgctgggggtgacg
ggctctggcaagactttcagcatcgccaacgtgattgcccaggtgcagcgcccgaccctg
gtcctggcgccgaacaagaccctggcggcccagctctacggggagttcaagacgttcttc
ccgcacaattccgtggagtacttcgtttcctactacgactactaccagccggaggcctac
gtcccgtcttccgatacctatatcgagaaggactcctcgatcaacgaccatatcgagcag
atgcgcctgtcggcgaccaaggcgctgctcgagcgtccggatgcgatcatcgtcgccacc
gtgtcgtccatctacggcctcggtgatcccgcgtcctacctgaagatggtcctgcacctg
gaccgcggcgaccgcatcgaccagcgcgaactgctgcggcgactgaccagcctgcagtac
acccgcaacgacatggatttcgcccgtgcgactttccgtgtgcgtggcgatgtgatcgac
atcttcccggccgaatccgatctcgaggcgattcgtgtcgagttgttcgacgacgaggtg
gaaagcctctcggccttcgatccgctcaccggcgaggtgatccgcaagctgccgcgcttc
accttctaccccaagagccactacgtgaccccgcgcgagacgctgctggaggcggtcgac
cagatcaaggccgaactcaaggaacgcctggactacctgcgcaacaacaacaagctggtg
gaagcgcagcgcctggagcagcgcacccgtttcgacctggagatgatcctcgagctgggc
tactgcaacggcatcgagaactactcgcgctatctttccgggcgggcccccggcgagccg
ccgccgacgctctacgactacctgccggccaactcgctgctggttatcgacgaatcgcac
gtcagcgttccgcaggtcggtgcgatgttcaagggcgaccgctcgcgcaaggagaccctg
gtggaatacggtttccgcctgccttcggcgctggacaaccggccgctgcgcttcgaagag
tgggaggcggtgagtccgcagaccatcttcgtctccgccaccccgggcccctacgaggcg
gagcatgccgggcgggtcatcgagcaggtggtgcgtcccaccgggctggtcgatccggag
atcgaggtacgtccggcgatgacccaggtggacgacctgctctcgcagatccgccagcgt
gtggccaaggacgagcgggtgctggtgactaccctgaccaagcgcatggccgaggacctc
accgattatctcggcgatcacgacgtgcgggtgcgctacttgcactcggacatcgatacc
gtcgagcgagtggagatcatccgcgacctgcgcgccggtgcgttcgacgtgctggtgggg
atcaacctgctgcgcgaaggcctggacatgcccgaggtgtcgctggtggcgatcctcgac
gcggacaaggaaggcttcctgcgctcggagcgctcgctgatccagaccatcggtcgtgcc
gcgcgcaacctgcacggcaaggcgatcctctacgccgacaacgtcaccggctcgatgcag
cgtgcgatcgacgagaccgagcggcgtcgggccaagcagatcgccttcaacgaagcccat
ggcatcgtgcccaagggggtgcgcaaggacatcaaggacattctcgaaggcgccgtggtg
cccggcgcgcgcggcaagcgcaagggcgtggccaaggtggcggaggagagcgggcgctac
gagaacgaactgcgctcgccgagcgagatcagcaagcgcatccgccaactggaggaaaag
atgtaccagttggcccgcgacctggagttcgaggcggcggcgcaactgcgcgacgagatc
cagacgctgcgcgagcgcctggtcaacgtctga
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integrated database retrieval system
