Pseudomonas aeruginosa YL84: AI22_27125
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Entry
AI22_27125 CDS
T03035
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
paeg
Pseudomonas aeruginosa YL84
Pathway
paeg03410
Base excision repair
paeg03430
Mismatch repair
paeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AI22_27125
03430 Mismatch repair
AI22_27125
03440 Homologous recombination
AI22_27125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paeg03400
]
AI22_27125
DNA repair and recombination proteins [BR:
paeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AI22_27125
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AI22_27125
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AI22_27125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AHH52510
LinkDB
All DBs
Position
complement(5865871..5867586)
Genome browser
AA seq
571 aa
AA seq
DB search
MRIEPRPLPETLPDLGDLPPLLARLYAARGVRCAEELDKGLARLIPFQRLKGIEEGVALL
VDALEGGQRILIVGDFDADGATASSVGVLALRMLGAAWVDYLVPNRFEYGYGLTPEIVGV
ALEKRPDLLVTVDNGISSVDGVQAAKAAGLKVLVTDHHLPGPELPAADAIINPNQPGCEF
PSKAMAGVGVIFYVMLALRARLRELDWFARRGLKEPNLAELLDLVALGSVADVVPLDANN
RILVHQGLARIRAGRARPGLRALLEVAGRPPVRITSTDLGFILGPRLNAAGRLDDMSLGI
ECLLCDDEALARDMAVQLDQLNQDRKAIEQGMQREALAQLKELSLEQLPFGLCLFDADWH
QGVIGILASRLKERYHRPTIAFADAGDGSLKGSARSIPGFHIRDALDAVAARHPGLISKF
GGHAMAAGLSLPQENFGAFSAAFDAEVRRQLAEEDLAGRLLSDGQLSIQEFHLELARALR
QAGPWGQHFPEPMFHGVFQLVQQRIVGERHLKLVLKSECGSLQLDGIAFNIDREQWPNPT
VRWAELAYKLDVNEFRGQESVQLMIVHMAPR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaaccccgccccctgcccgaaaccctgcccgatctcggcgaccttccgcca
ttgctggcacgcctgtacgcagctcgtggcgtgcgttgcgccgaggagctggacaagggc
ctggcgcggctgattcccttccagcggctgaaaggcatcgaggagggcgtggcgctgctg
gtggatgccctggagggcggccagcggattctcatcgtcggcgacttcgacgccgacggc
gccaccgccagcagcgtcggcgtgctggccctgcgcatgctcggcgcggcctgggtcgat
tacctggtgccgaaccgcttcgagtacggctacggcctgaccccggagatcgtcggcgtg
gccctggagaagcgtcccgacctgctggtgacggtggacaacggcatctccagcgtggac
ggcgtccaggcggcgaaagccgcggggctcaaggtgctggtcaccgaccaccacctgcct
ggcccggaactgccggcggcggatgcgatcatcaaccccaaccagccgggctgcgaattc
cccagcaaggccatggccggggtcggggtgatcttctatgtgatgctggcgttgcgggcg
cgcctgcgcgagctggactggttcgcccggcgcgggctgaaggaaccgaacctcgccgag
ctgctcgacctggtggcgctgggcagcgtcgccgatgtggtgccgctcgatgccaacaac
cgcatcctggtccaccagggcctcgcgcgcatccgcgccggccgcgcccggccgggcttg
cgcgcgctgctggaggtggccgggcggcctccggtacggatcacctccaccgacctgggt
tttatcctcggtccgcgcctgaacgcggcgggtcggctcgacgacatgtccctcggcatc
gaatgcctgctctgcgacgacgaagcgctggcccgcgacatggcggtgcagctcgaccag
ttgaaccaggaccgcaaggccatcgagcagggtatgcagcgcgaggcgctggcgcagctc
aaggagctgagcctggagcaactgccgttcggcttgtgcctgttcgacgccgactggcac
cagggcgtgatcggaatcctcgcctcgcgcctgaaggagcgttaccaccggccgaccatc
gccttcgccgacgccggcgacggcagcctgaaaggctcggcacggtcgattcccggcttc
cacatccgcgacgcgctggacgcggtagccgcccgtcatcccgggctgatcagcaagttc
ggcggccacgcgatggctgccggactatcgttgccgcaggaaaacttcggcgctttctcc
gccgccttcgatgccgaagtacgccgccaactggccgaggaggacctggccgggcgcctg
ctctccgatggccagttgagcatccaggagttccacctggagctggcgcgcgcgttgcgc
caggccggtccctggggccagcactttcccgagccgatgttccacggggtgttccagctg
gtgcagcagcggatcgtcggcgagcgtcacctgaagctggtgctgaaaagcgaatgcggc
tcgctgcaactggatggcattgccttcaacatcgaccgcgagcagtggcccaaccctacc
gtgcgctgggccgagctggcctacaagctcgacgtcaacgaattccgcggccaggaaagc
gtgcaactgatgatcgtccacatggcccctcgctga
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