Pseudomonas aeruginosa YL84: AI22_28280
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Entry
AI22_28280 CDS
T03035
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
paeg
Pseudomonas aeruginosa YL84
Pathway
paeg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
paeg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AI22_28280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paeg03021
]
AI22_28280
Transcription machinery [BR:
paeg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AI22_28280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_IclR
HTH_24
DUF8658
Xre-like-HTH
GerE
TnsD
HTH_7
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AHH52727
LinkDB
All DBs
Position
6106633..6107142
Genome browser
AA seq
169 aa
AA seq
DB search
MSSADLAHAAALHTLYSDHHHWLTGWLRRRLGCPQNAADLAQDTFVKVLVSRQAARIDEP
RAFLTTIARRVLCNHYRRQDVERAYLEALASLPEREVPSEETRAIVLETLVELDRLLDGL
PPLAKETFLLAQLDGLGYAEIATQLGISLSSVKRYMLKAAQRCYFAEQP
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgagcgccgacctcgcccatgcggccgcgttgcataccctctacagcgaccaccac
cactggctcacgggctggctgcggcgccgcctcggctgcccgcagaacgccgccgacctg
gcccaggacaccttcgtcaaggtcctggtttcgcgccaggccgcgcgcatcgacgaaccg
cgcgccttcctcaccaccatcgcccgccgcgtgctgtgcaaccactaccgccgccaggac
gtcgagcgcgcctacctggaagccctggccagcctgcccgagcgggaagtccccagcgaa
gagacccgcgccatcgtcctggagaccctggtcgagctggaccgtctgctcgacggtctg
ccgccgctggccaaggagaccttcctgctggcccaactcgacggcctgggctacgccgag
atcgccacgcagctgggcatctccctgagcagcgtcaagcgctacatgctcaaggctgcg
caacgctgctacttcgccgagcagccatga
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